RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 SLC22A18ASQ8N1D0 253 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 AKR7LQ8NHP1 331 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 MR1Q95460 341 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 GALNT14Q96FL9 552 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 TM2D1Q9BX74 207 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 WFDC1Q9HC57 220 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 PADI1Q9ULC6 663 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 KLF8O95600 359 aaPredicted RBP17.35■□□□□ 0.37
SDF4-205ENST00000465727 F10P00742 488 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 ZNF17P17021 662 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 HIKESHIQ53FT3 197 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 STT3BQ8TCJ2 826 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 HPSE2Q8WWQ2 592 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 TSLPQ969D9 159 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 DOK5Q9P104 306 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 LHFPL6Q9Y693 200 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 CXorf65A6NEN9 183 aa17.34■□□□□ 0.37
SDF4-205ENST00000465727 K7N7A8 449 aa17.34■□□□□ 0.37
SDF4-205ENST00000465727 AFF3P51826 1226 aaKnown RBP17.34■□□□□ 0.37
SDF4-205ENST00000465727 LRTM2Q8N967 370 aa17.34■□□□□ 0.37
SDF4-205ENST00000465727 ZNF610Q8N9Z0 462 aa17.34■□□□□ 0.37
SDF4-205ENST00000465727 ZNF383Q8NA42 475 aa17.34■□□□□ 0.37
SDF4-205ENST00000465727 SLAMF9Q96A28 289 aa17.34■□□□□ 0.37
SDF4-205ENST00000465727 ZDHHC12Q96GR4 267 aa17.34■□□□□ 0.37
SDF4-205ENST00000465727 SPSB2Q99619 263 aa17.34■□□□□ 0.37
SDF4-205ENST00000465727 POLR1DQ9Y2S0 133 aa17.34■□□□□ 0.37
SDF4-205ENST00000465727 PUS1Q9Y606 427 aaKnown RBP eCLIP17.34■□□□□ 0.37
SDF4-205ENST00000465727 DOCK8Q8NF50 2099 aa17.34■□□□□ 0.37
SDF4-205ENST00000465727 BTBD17A6NE02 478 aa17.33■□□□□ 0.37
SDF4-205ENST00000465727 HIST1H1BP16401 226 aaKnown RBP17.33■□□□□ 0.37
SDF4-205ENST00000465727 APOBEC1P41238 236 aaKnown RBP17.33■□□□□ 0.37
SDF4-205ENST00000465727 ZNF121P58317 390 aaPredicted RBP17.33■□□□□ 0.37
SDF4-205ENST00000465727 SLC16A14Q7RTX9 510 aa17.33■□□□□ 0.37
SDF4-205ENST00000465727 FGF14Q92915 247 aa17.33■□□□□ 0.37
SDF4-205ENST00000465727 FAM71F1Q96KD3 344 aaPredicted RBP17.33■□□□□ 0.37
SDF4-205ENST00000465727 MRGPRX1Q96LB2 322 aa17.33■□□□□ 0.37
SDF4-205ENST00000465727 ZNF701Q9NV72 531 aaPredicted RBP17.33■□□□□ 0.37
SDF4-205ENST00000465727 COPS7AQ9UBW8 275 aa17.33■□□□□ 0.37
SDF4-205ENST00000465727 TCFL5Q9UL49 500 aa17.33■□□□□ 0.37
SDF4-205ENST00000465727 ELOA3CA0A087WX78 387 aaPredicted RBP17.33■□□□□ 0.36
SDF4-205ENST00000465727 A0A1W2PNV4 684 aa17.33■□□□□ 0.36
SDF4-205ENST00000465727 TLCD2A6NGC4 264 aa17.33■□□□□ 0.36
SDF4-205ENST00000465727 KLK3P07288 261 aaPredicted RBP17.33■□□□□ 0.36
SDF4-205ENST00000465727 RD3LP0DJH9 198 aa17.33■□□□□ 0.36
SDF4-205ENST00000465727 CTSEP14091 401 aa17.33■□□□□ 0.36
SDF4-205ENST00000465727 CAPZBP47756 277 aa17.33■□□□□ 0.36
SDF4-205ENST00000465727 BIDP55957 195 aa17.33■□□□□ 0.36
SDF4-205ENST00000465727 NDUFA6P56556 154 aa17.33■□□□□ 0.36
SDF4-205ENST00000465727 KISS1Q15726 138 aa17.33■□□□□ 0.36
SDF4-205ENST00000465727 OR13D1Q8NGV5 346 aa17.33■□□□□ 0.36
SDF4-205ENST00000465727 SGK3Q96BR1 496 aa17.33■□□□□ 0.36
SDF4-205ENST00000465727 DDIT4LQ96D03 193 aa17.33■□□□□ 0.36
SDF4-205ENST00000465727 MRPL13Q9BYD1 178 aaKnown RBP17.33■□□□□ 0.36
SDF4-205ENST00000465727 SIRT7Q9NRC8 400 aa17.33■□□□□ 0.36
SDF4-205ENST00000465727 CEP290O15078 2479 aa17.33■□□□□ 0.36
SDF4-205ENST00000465727 IGKV1-9A0A0C4DH69 117 aa17.32■□□□□ 0.36
SDF4-205ENST00000465727 BCAT2O15382 392 aaPredicted RBP17.32■□□□□ 0.36
SDF4-205ENST00000465727 GTF3AQ92664 365 aaKnown RBP17.32■□□□□ 0.36
SDF4-205ENST00000465727 NTNG2Q96CW9 530 aa17.32■□□□□ 0.36
SDF4-205ENST00000465727 SUCNR1Q9BXA5 334 aa17.32■□□□□ 0.36
SDF4-205ENST00000465727 NSG1A0A0A6YYJ2 146 aa17.32■□□□□ 0.36
SDF4-205ENST00000465727 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.32■□□□□ 0.36
SDF4-205ENST00000465727 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.32■□□□□ 0.36
SDF4-205ENST00000465727 ANKUB1A6NFN9 424 aa17.32■□□□□ 0.36
SDF4-205ENST00000465727 RPL36A-HNRNPH2H7BZ11 118 aa17.32■□□□□ 0.36
SDF4-205ENST00000465727 H7C1Q1 480 aa17.32■□□□□ 0.36
SDF4-205ENST00000465727 C1QL1O75973 258 aa17.32■□□□□ 0.36
SDF4-205ENST00000465727 ZNF133P52736 654 aaPredicted RBP17.32■□□□□ 0.36
SDF4-205ENST00000465727 GABREP78334 506 aa17.32■□□□□ 0.36
SDF4-205ENST00000465727 Q3ZCU0 254 aa17.32■□□□□ 0.36
SDF4-205ENST00000465727 BSCL2Q96G97 398 aaPredicted RBP17.32■□□□□ 0.36
SDF4-205ENST00000465727 SOX7Q9BT81 388 aa17.32■□□□□ 0.36
SDF4-205ENST00000465727 SH3BGRL3Q9H299 93 aa17.32■□□□□ 0.36
SDF4-205ENST00000465727 PRDM13Q9H4Q3 707 aa17.32■□□□□ 0.36
SDF4-205ENST00000465727 ALKBH4Q9NXW9 302 aa17.32■□□□□ 0.36
SDF4-205ENST00000465727 RBFOX3A6NFN3 312 aa17.31■□□□□ 0.36
SDF4-205ENST00000465727 DUSP1P28562 367 aa17.31■□□□□ 0.36
SDF4-205ENST00000465727 PPP1CCP36873 323 aaKnown RBP17.31■□□□□ 0.36
SDF4-205ENST00000465727 RBP2P50120 134 aa17.31■□□□□ 0.36
SDF4-205ENST00000465727 TMEM187Q14656 261 aa17.31■□□□□ 0.36
SDF4-205ENST00000465727 ZNF441Q8N8Z8 693 aa17.31■□□□□ 0.36
SDF4-205ENST00000465727 FAM213BQ8TBF2 198 aa17.31■□□□□ 0.36
SDF4-205ENST00000465727 RELTQ969Z4 430 aa17.31■□□□□ 0.36
SDF4-205ENST00000465727 CYYR1Q96J86 154 aa17.31■□□□□ 0.36
SDF4-205ENST00000465727 NAA60Q9H7X0 242 aa17.31■□□□□ 0.36
SDF4-205ENST00000465727 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 H3BQ15 152 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 IFNA10P01566 189 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 ZNF43P17038 809 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 SERPINA2P20848 420 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 SUMO3P55854 103 aaPredicted RBP17.3■□□□□ 0.36
SDF4-205ENST00000465727 PIGPP57054 158 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 ZNF542PQ5EBM4 170 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 PLXDC2Q6UX71 529 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 CLEC9AQ6UXN8 241 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 HSD17B11Q8NBQ5 300 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 APCDD1LQ8NCL9 501 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 OR1N1Q8NGS0 311 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 OR14K1Q8NGZ2 314 aa17.3■□□□□ 0.36
SDF4-205ENST00000465727 GAS2L1Q99501 681 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms