RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 OR1M1Q8NGA1 313 aa14.28□□□□□ -0.12
VPS52-215ENST00000464425 ITPKCQ96DU7 683 aa14.28□□□□□ -0.12
VPS52-215ENST00000464425 FAHD2AQ96GK7 314 aa14.28□□□□□ -0.12
VPS52-215ENST00000464425 OR5M11Q96RB7 305 aa14.28□□□□□ -0.12
VPS52-215ENST00000464425 NR1H4Q96RI1 486 aaPredicted RBP14.28□□□□□ -0.12
VPS52-215ENST00000464425 METTL17Q9H7H0 456 aaPredicted RBP14.28□□□□□ -0.12
VPS52-215ENST00000464425 PATZ1Q9HBE1 687 aaKnown RBP14.28□□□□□ -0.12
VPS52-215ENST00000464425 ACOT13Q9NPJ3 140 aa14.28□□□□□ -0.12
VPS52-215ENST00000464425 HHLA2Q9UM44 414 aa14.28□□□□□ -0.12
VPS52-215ENST00000464425 PIGLQ9Y2B2 252 aa14.28□□□□□ -0.12
VPS52-215ENST00000464425 MPC1Q9Y5U8 109 aa14.28□□□□□ -0.12
VPS52-215ENST00000464425 TRAV20A0A0B4J274 112 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 ZNF816-ZNF321PA0A0X1KG74 233 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 LOC107986453A0A1B0GWG9 222 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 CEACAM18A8MTB9 384 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 H3BSH0 61 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 ZFP36P26651 326 aaKnown RBP14.27□□□□□ -0.13
VPS52-215ENST00000464425 MAP2K4P45985 399 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 SEC61A1P61619 476 aaKnown RBP14.27□□□□□ -0.13
VPS52-215ENST00000464425 KCTD8Q6ZWB6 473 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 PRIMA1Q86XR5 153 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 C11orf53Q8IXP5 236 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 ZDHHC23Q8IYP9 409 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 OR5P3Q8WZ94 311 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 RNF170Q96K19 258 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 HIST1H2AAQ96QV6 131 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 PDCD1LG2Q9BQ51 273 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 TMEM246Q9BRR3 403 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 ZNF696Q9H7X3 374 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 ABCB9Q9NP78 766 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 LPAR3Q9UBY5 353 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 ENPP5Q9UJA9 477 aa14.27□□□□□ -0.13
VPS52-215ENST00000464425 ARHGAP32A7KAX9 2087 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 A6NIN4 97 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 C3orf80F5H4A9 247 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 FAHP16930 419 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 PCMT1P22061 227 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 CD80P33681 288 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 THBS2P35442 1172 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 ZNF154Q13106 437 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 DOC2BQ14184 412 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 ZNF404Q494X3 552 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 CEP78Q5JTW2 689 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 TMEM42Q69YG0 159 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 MOB3CQ70IA8 216 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 FCGR1BQ92637 280 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 GHSRQ92847 366 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 PGLYRP3Q96LB9 341 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 RTL8AQ9BWD3 113 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 FGF23Q9GZV9 251 aaPredicted RBP14.26□□□□□ -0.13
VPS52-215ENST00000464425 ZNF281Q9Y2X9 895 aa14.26□□□□□ -0.13
VPS52-215ENST00000464425 CDIPTO14735 213 aa14.25□□□□□ -0.13
VPS52-215ENST00000464425 WNT2P09544 360 aa14.25□□□□□ -0.13
VPS52-215ENST00000464425 RPS2P15880 293 aaKnown RBP14.25□□□□□ -0.13
VPS52-215ENST00000464425 CELP19835 753 aa14.25□□□□□ -0.13
VPS52-215ENST00000464425 HNF1AP20823 631 aa14.25□□□□□ -0.13
VPS52-215ENST00000464425 MLLT11Q13015 90 aaPredicted RBP14.25□□□□□ -0.13
VPS52-215ENST00000464425 TPBGQ13641 420 aa14.25□□□□□ -0.13
VPS52-215ENST00000464425 YIF1BQ5BJH7 314 aa14.25□□□□□ -0.13
VPS52-215ENST00000464425 UBE2UQ5VVX9 321 aa14.25□□□□□ -0.13
VPS52-215ENST00000464425 ZNF367Q7RTV3 350 aa14.25□□□□□ -0.13
VPS52-215ENST00000464425 GPR148Q8TDV2 347 aa14.25□□□□□ -0.13
VPS52-215ENST00000464425 LRRC29Q8WV35 223 aa14.25□□□□□ -0.13
VPS52-215ENST00000464425 HPSE2Q8WWQ2 592 aa14.25□□□□□ -0.13
VPS52-215ENST00000464425 RPL3LQ92901 407 aaKnown RBP14.25□□□□□ -0.13
VPS52-215ENST00000464425 MGLLQ99685 303 aa14.25□□□□□ -0.13
VPS52-215ENST00000464425 WNK2Q9Y3S1 2297 aa14.25□□□□□ -0.13
VPS52-215ENST00000464425 A0A087WXM4 84 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 F5H0A9 414 aaPredicted RBP14.24□□□□□ -0.13
VPS52-215ENST00000464425 LGALS8O00214 317 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 PHF1O43189 567 aaPredicted RBP14.24□□□□□ -0.13
VPS52-215ENST00000464425 FOXH1O75593 365 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 FAM157CP0CG43 387 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 EGR1P18146 543 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 SRD5A1P18405 259 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 GPM6AP51674 278 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 CLVS2Q5SYC1 327 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 LYPD2Q6UXB3 125 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 WDR82Q6UXN9 313 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 GCSAMQ8N6F7 178 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 ZFP41Q8N8Y5 198 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 TSPAN14Q8NG11 270 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 OR51A4Q8NGJ6 313 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 OR13C3Q8NGS6 347 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 OR10AC1Q8NH08 325 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 PP6455Q8WZ26 134 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 PLEKHA1Q9HB21 404 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 MIOXQ9UGB7 285 aa14.24□□□□□ -0.13
VPS52-215ENST00000464425 IGHV3OR15-7A0A075B7D8 119 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 A0A0G2JMP0 313 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 A0A0X1KG70 313 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 OOEPA6NGQ2 149 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 ZNF732B4DXR9 585 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 FSTL3O95633 263 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 SERPINA3P01011 423 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 NRASP01111 189 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 LHBP01229 141 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 HSMCR30P0CW71 290 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 CPEP16870 476 aa14.23□□□□□ -0.13
VPS52-215ENST00000464425 SRP14P37108 136 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms