RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 A0A1W2PRD5 423 aa15.48■□□□□ 0.07
SF3A1-205ENST00000463818 A0A1W2PRF3 423 aa15.48■□□□□ 0.07
SF3A1-205ENST00000463818 A0A1W2PRM7 423 aa15.48■□□□□ 0.07
SF3A1-205ENST00000463818 CLPSL1A2RUU4 121 aa15.48■□□□□ 0.07
SF3A1-205ENST00000463818 RNASEK-C17orf49H0YIS7 233 aa15.48■□□□□ 0.07
SF3A1-205ENST00000463818 GPR137BO60478 399 aa15.48■□□□□ 0.07
SF3A1-205ENST00000463818 IGLV3-1P01715 115 aa15.48■□□□□ 0.07
SF3A1-205ENST00000463818 DLX1P56177 255 aa15.48■□□□□ 0.07
SF3A1-205ENST00000463818 ZNF829Q3KNS6 432 aaPredicted RBP15.48■□□□□ 0.07
SF3A1-205ENST00000463818 TCEANCQ8N8B7 351 aa15.48■□□□□ 0.07
SF3A1-205ENST00000463818 NPRL2Q8WTW4 380 aa15.48■□□□□ 0.07
SF3A1-205ENST00000463818 APOL4Q9BPW4 351 aa15.48■□□□□ 0.07
SF3A1-205ENST00000463818 SEMA6AQ9H2E6 1030 aa15.48■□□□□ 0.07
SF3A1-205ENST00000463818 NUFIP1Q9UHK0 495 aaKnown RBP15.48■□□□□ 0.07
SF3A1-205ENST00000463818 PIGLQ9Y2B2 252 aa15.48■□□□□ 0.07
SF3A1-205ENST00000463818 CAB39Q9Y376 341 aaPredicted RBP15.48■□□□□ 0.07
SF3A1-205ENST00000463818 IGKV1D-17A0A075B6S4 117 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 M0R129 80 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 MAGEB4O15481 346 aaPredicted RBP15.47■□□□□ 0.07
SF3A1-205ENST00000463818 PSG2P11465 335 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 FAHP16930 419 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 EEF1B2P24534 225 aaKnown RBP15.47■□□□□ 0.07
SF3A1-205ENST00000463818 EPHA2P29317 976 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 CAV3P56539 151 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 RPL15P61313 204 aaKnown RBP15.47■□□□□ 0.07
SF3A1-205ENST00000463818 EFNB1P98172 346 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 MFGE8Q08431 387 aaPredicted RBP15.47■□□□□ 0.07
SF3A1-205ENST00000463818 AADACL4Q5VUY2 407 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 C1orf146Q5VVC0 180 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 HAGHLQ6PII5 290 aaPredicted RBP15.47■□□□□ 0.07
SF3A1-205ENST00000463818 ZNF322Q6U7Q0 402 aaPredicted RBP15.47■□□□□ 0.07
SF3A1-205ENST00000463818 TREML4Q6UXN2 200 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 C17orf107Q6ZR85 190 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 C1orf122Q6ZSJ8 110 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 AQP3Q92482 292 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 TNFRSF14Q92956 283 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 PRRG3Q9BZD7 231 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 DPAGT1Q9H3H5 408 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 KRT84Q9NSB2 600 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 ENPP5Q9UJA9 477 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 MAB21L2Q9Y586 359 aa15.47■□□□□ 0.07
SF3A1-205ENST00000463818 OR5B21A6NL26 309 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 G3V2T6 193 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 MTRF1O75570 445 aaKnown RBP15.46■□□□□ 0.07
SF3A1-205ENST00000463818 NRASP01111 189 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 TTRP02766 147 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 FBP1P09467 338 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 CXCR4P61073 352 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 ACTR3P61158 418 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 GUCA2AQ02747 115 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 KLRD1Q13241 179 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 ATP6AP1Q15904 470 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 ZBTB37Q5TC79 503 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 SLX4IPQ5VYV7 408 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 PLCXD3Q63HM9 321 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 SLC35F2Q8IXU6 374 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 ZNRF1Q8ND25 227 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 TMEM163Q8TC26 289 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 WFDC12Q8WWY7 111 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 GTF2A1LQ9UNN4 478 aa15.46■□□□□ 0.07
SF3A1-205ENST00000463818 PKD1L1Q8TDX9 2849 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 A0A1W2PQ09 198 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 SLC22A31A6NKX4 558 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 ZAR1LA6NP61 321 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 LOC110117498-PIK3R3F6TDL0 507 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 NPFFO15130 113 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 SRSF10O75494 262 aaKnown RBP15.45■□□□□ 0.06
SF3A1-205ENST00000463818 DHRS3O75911 302 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 ZNF684Q5T5D7 378 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 NXNL2Q5VZ03 156 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 C12orf73Q69YU5 71 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 KDM4DQ6B0I6 523 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 PNKDQ8N490 385 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 TMEM185AQ8NFB2 350 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 SDSLQ96GA7 329 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 IL4I1Q96RQ9 567 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 MNTQ99583 582 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 ELL3Q9HB65 397 aaPredicted RBP15.45■□□□□ 0.06
SF3A1-205ENST00000463818 ADGRL4Q9HBW9 690 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 RASL12Q9NYN1 266 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 ZNF222Q9UK12 451 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 OR52A1Q9UKL2 312 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 RNF114Q9Y508 228 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 AP4S1Q9Y587 144 aa15.45■□□□□ 0.06
SF3A1-205ENST00000463818 ZNF670-ZNF695F2Z2N8 137 aa15.44■□□□□ 0.06
SF3A1-205ENST00000463818 M0R1W7 72 aa15.44■□□□□ 0.06
SF3A1-205ENST00000463818 FASP25445 335 aa15.44■□□□□ 0.06
SF3A1-205ENST00000463818 UBE2E1P51965 193 aa15.44■□□□□ 0.06
SF3A1-205ENST00000463818 TAF9Q16594 264 aa15.44■□□□□ 0.06
SF3A1-205ENST00000463818 CLVS2Q5SYC1 327 aa15.44■□□□□ 0.06
SF3A1-205ENST00000463818 ACP7Q6ZNF0 438 aa15.44■□□□□ 0.06
SF3A1-205ENST00000463818 GDPGP1Q6ZNW5 385 aa15.44■□□□□ 0.06
SF3A1-205ENST00000463818 PLEKHG7Q6ZR37 379 aa15.44■□□□□ 0.06
SF3A1-205ENST00000463818 AMIGO2Q86SJ2 522 aa15.44■□□□□ 0.06
SF3A1-205ENST00000463818 ELMOD2Q8IZ81 293 aa15.44■□□□□ 0.06
SF3A1-205ENST00000463818 LINC01006Q8NI28 216 aa15.44■□□□□ 0.06
SF3A1-205ENST00000463818 ZNF488Q96MN9 340 aa15.44■□□□□ 0.06
SF3A1-205ENST00000463818 METTL8Q9H825 291 aaKnown RBP15.44■□□□□ 0.06
SF3A1-205ENST00000463818 GPR173Q9NS66 373 aa15.44■□□□□ 0.06
SF3A1-205ENST00000463818 CLN6Q9NWW5 311 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms