RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-223	ENST00000463004	ZNF75A	Q96N20	296 aa		10.35	□□□□□ -0.75
RBM39-223	ENST00000463004	SPACA5	Q96QH8	159 aa		10.35	□□□□□ -0.75
RBM39-223	ENST00000463004	RNF122	Q9H9V4	155 aa		10.35	□□□□□ -0.75
RBM39-223	ENST00000463004	CCDC88C	Q9P219	2028 aa		10.35	□□□□□ -0.75
RBM39-223	ENST00000463004	OR2F2	O95006	317 aa		10.35	□□□□□ -0.75
RBM39-223	ENST00000463004	OR2F1	Q13607	317 aa		10.35	□□□□□ -0.75
RBM39-223	ENST00000463004	TMEM128	Q5BJH2	165 aa		10.35	□□□□□ -0.75
RBM39-223	ENST00000463004	FAM209A	Q5JX71	171 aa		10.35	□□□□□ -0.75
RBM39-223	ENST00000463004	PIK3IP1	Q96FE7	263 aa		10.35	□□□□□ -0.75
RBM39-223	ENST00000463004	S1PR3	Q99500	378 aa		10.35	□□□□□ -0.75
RBM39-223	ENST00000463004	SULT4A1	Q9BR01	284 aa		10.35	□□□□□ -0.75
RBM39-223	ENST00000463004	PTDSS2	Q9BVG9	487 aa		10.35	□□□□□ -0.75
RBM39-223	ENST00000463004	ZNF703	Q9H7S9	590 aa	Predicted RBP	10.35	□□□□□ -0.75
RBM39-223	ENST00000463004	CNTD2	Q9H8S5	307 aa		10.35	□□□□□ -0.75
RBM39-223	ENST00000463004	MEIKIN	A0A087WXM9	373 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	LOC390937	A0A1W2PQ73	354 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	AQP7	O14520	342 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	ST8SIA3	O43173	380 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	HYAL3	O43820	417 aa	Predicted RBP	10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	GPM6A	P51674	278 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	PLA2G7	Q13093	441 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	TMEM185A	Q8NFB2	350 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	OR52N4	Q8NGI2	321 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	GLYATL2	Q8WU03	294 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	VOPP1	Q96AW1	172 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	RHOF	Q9HBH0	211 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	FAM90A10P	A6NDY2	464 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	FAM90A18P	A6NE21	464 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	FAM90A16P	A6NEW6	464 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	FAM90A20P	A6NIJ5	464 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	FAM90A8P	A6NJQ4	464 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	FAM90A7P	A6NKC0	464 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	CEBPZOS	A8MTT3	80 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	FAM90A22P	A8MWA6	464 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	FAM90A12P	A8MX19	464 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	FAM90A5P	A8MXJ8	464 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	FAM90A23P	A8MXZ1	464 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	C9orf172	C9J069	976 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	HS3ST1	O14792	307 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	ST8SIA5	O15466	376 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	THY1	P04216	161 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	FAM90A15P	P0C7V4	464 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	FAM90A13P	P0C7W8	464 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	FAM90A14P	P0C7W9	464 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	FAM90A24P	P0C7X0	464 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	EPHA1	P21709	976 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	OR2T2	Q6IF00	324 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	CADM3	Q8N126	398 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	RDH5	Q92781	318 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	CMBL	Q96DG6	245 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	ARPC5L	Q9BPX5	153 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	NUDT16L1	Q9BRJ7	211 aa	Known RBP	10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	THADA	Q6YHU6	1953 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	C16orf97	H3BN30	126 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	FABP7	O15540	132 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	LYZL6	O75951	148 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	DTYMK	P23919	212 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	SORD	Q00796	357 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	OR4D6	Q8NGJ1	314 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	LUZP4	Q9P127	313 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	10.34	□□□□□ -0.75
RBM39-223	ENST00000463004		A0A0B4J203	849 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	ANKRD20A5P	A0PJZ0	165 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	PNP	P00491	289 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	TTR	P02766	147 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	CD3E	P07766	207 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	BMP5	P22003	454 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	HRH1	P35367	487 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	PLGLA	Q15195	96 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	MPPED2	Q15777	294 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	OR10K2	Q6IF99	312 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	GALM	Q96C23	342 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	TSNAX	Q99598	290 aa	Known RBP	10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	SFXN3	Q9BWM7	321 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	HINT2	Q9BX68	163 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	PLEKHA2	Q9HB19	425 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	KCNJ16	Q9NPI9	418 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	UFSP2	Q9NUQ7	469 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	MRPS18B	Q9Y676	258 aa	Known RBP	10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	AHCTF1	Q8WYP5	2266 aa		10.34	□□□□□ -0.75
RBM39-223	ENST00000463004	MAP1B	P46821	2468 aa	Known RBP	10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	IFNL4	K9M1U5	179 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	UPK3A	O75631	287 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	KLF7	O75840	302 aa	Predicted RBP	10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	OR4E1	P0C645	316 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	NAT2	P11245	290 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	ZNF83	P51522	516 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	RAB11A	P62491	216 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	OPCML	Q14982	345 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	COMTD1	Q86VU5	262 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	LRRC75A	Q8NAA5	344 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	OR4A16	Q8NH70	328 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	ABHD5	Q8WTS1	349 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	PRDM14	Q9GZV8	571 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	DOCK8	Q8NF50	2099 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	TRBV5-7	A0A0A0MS05	114 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	NPIPB7	O75200	414 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	CHRNB4	P30926	498 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	S100A11	P31949	105 aa		10.33	□□□□□ -0.76
RBM39-223	ENST00000463004	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms