RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 ZNF555Q8NEP9 628 aa18.66■□□□□ 0.58
TRAF4-207ENST00000461195 OR5T2Q8NGG2 359 aa18.66■□□□□ 0.58
TRAF4-207ENST00000461195 AQP3Q92482 292 aa18.66■□□□□ 0.58
TRAF4-207ENST00000461195 LGALS12Q96DT0 336 aa18.66■□□□□ 0.58
TRAF4-207ENST00000461195 JMJD8Q96S16 334 aa18.66■□□□□ 0.58
TRAF4-207ENST00000461195 DNTTIP1Q9H147 329 aa18.66■□□□□ 0.58
TRAF4-207ENST00000461195 PLEKHA1Q9HB21 404 aa18.66■□□□□ 0.58
TRAF4-207ENST00000461195 SNTG1Q9NSN8 517 aa18.66■□□□□ 0.58
TRAF4-207ENST00000461195 A6NIN4 97 aa18.65■□□□□ 0.58
TRAF4-207ENST00000461195 FCN3O75636 299 aa18.65■□□□□ 0.58
TRAF4-207ENST00000461195 ECDO95905 644 aaPredicted RBP18.65■□□□□ 0.58
TRAF4-207ENST00000461195 UBCP0CG48 685 aaKnown RBP18.65■□□□□ 0.58
TRAF4-207ENST00000461195 GLRA1P23415 457 aa18.65■□□□□ 0.58
TRAF4-207ENST00000461195 FGF12P61328 243 aa18.65■□□□□ 0.58
TRAF4-207ENST00000461195 BTN2A1Q7KYR7 527 aa18.65■□□□□ 0.58
TRAF4-207ENST00000461195 FAM216BQ8N7L0 139 aa18.65■□□□□ 0.58
TRAF4-207ENST00000461195 ST8SIA4Q92187 359 aa18.65■□□□□ 0.58
TRAF4-207ENST00000461195 MRPL48Q96GC5 212 aaKnown RBP18.65■□□□□ 0.58
TRAF4-207ENST00000461195 MYCBPQ99417 103 aaPredicted RBP18.65■□□□□ 0.58
TRAF4-207ENST00000461195 ZNF69Q9UC07 566 aa18.65■□□□□ 0.58
TRAF4-207ENST00000461195 A0A1B0GW55 424 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 NKX6-3A6NJ46 265 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 H3BSH0 61 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 NDUFB3O43676 98 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 DUX4L2P0CJ85 424 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 DUX4L3P0CJ86 424 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 DUX4L4P0CJ87 422 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 DUX4L5P0CJ88 424 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 DUX4L6P0CJ89 424 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 DUX4L7P0CJ90 424 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 KIR3DL2P43630 455 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 OR12D2P58182 307 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 ACTA2P62736 377 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 ACTG2P63267 376 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 RCN1Q15293 331 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 DUX4L9Q6RFH8 374 aaPredicted RBP18.64■□□□□ 0.57
TRAF4-207ENST00000461195 ZNF573Q86YE8 665 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 OR2G2Q8NGZ5 317 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 ZFAND2BQ8WV99 257 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 RNF166Q96A37 237 aaPredicted RBP18.64■□□□□ 0.57
TRAF4-207ENST00000461195 TMIGD2Q96BF3 282 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 C8orf4Q9NR00 106 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 NLKQ9UBE8 527 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 DUX4Q9UBX2 424 aa18.64■□□□□ 0.57
TRAF4-207ENST00000461195 LOC107986453A0A1B0GWG9 222 aa18.63■□□□□ 0.57
TRAF4-207ENST00000461195 PQLC2LA1A4F0 135 aa18.63■□□□□ 0.57
TRAF4-207ENST00000461195 ANKRD61A6NGH8 418 aa18.63■□□□□ 0.57
TRAF4-207ENST00000461195 FADS2O95864 444 aaKnown RBP18.63■□□□□ 0.57
TRAF4-207ENST00000461195 IGHV4-38-2P0DP08 117 aa18.63■□□□□ 0.57
TRAF4-207ENST00000461195 AMY2BP19961 511 aa18.63■□□□□ 0.57
TRAF4-207ENST00000461195 HAAOP46952 286 aa18.63■□□□□ 0.57
TRAF4-207ENST00000461195 TGM4P49221 684 aa18.63■□□□□ 0.57
TRAF4-207ENST00000461195 IKZF1Q13422 519 aa18.63■□□□□ 0.57
TRAF4-207ENST00000461195 LRRC36Q1X8D7 754 aa18.63■□□□□ 0.57
TRAF4-207ENST00000461195 FDX2Q6P4F2 183 aa18.63■□□□□ 0.57
TRAF4-207ENST00000461195 ANGPTL6Q8NI99 470 aa18.63■□□□□ 0.57
TRAF4-207ENST00000461195 MS4A7Q9GZW8 240 aaPredicted RBP18.63■□□□□ 0.57
TRAF4-207ENST00000461195 AMBNQ9NP70 447 aa18.63■□□□□ 0.57
TRAF4-207ENST00000461195 RPL36Q9Y3U8 105 aaKnown RBP18.63■□□□□ 0.57
TRAF4-207ENST00000461195 ANK2Q01484 3957 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 TRAV40A0A0B4J280 105 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 OR2AT4A6NND4 320 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 ZNF879B4DU55 563 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 J3QLW9 94 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 J3QT63 122 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 GPR37O15354 613 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 HTR1AP08908 422 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 ZNF19P17023 458 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 RAB40BQ12829 278 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 GALEQ14376 348 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 LRRC10Q5BKY1 277 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 TMEM244Q5VVB8 128 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 LPCAT4Q643R3 524 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 ZNF788Q6ZQV5 615 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 LHFPL3Q86UP9 236 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 FGFRL1Q8N441 504 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 APH1BQ8WW43 257 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 C10orf35Q96D05 121 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 MED30Q96HR3 178 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 C4orf36Q96KX1 117 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 ALG8Q9BVK2 526 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 RASL12Q9NYN1 266 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 FRRS1LQ9P0K9 344 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 RPUSD1Q9UJJ7 312 aaKnown RBP18.62■□□□□ 0.57
TRAF4-207ENST00000461195 SLC7A11Q9UPY5 501 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 POLDIP2Q9Y2S7 368 aa18.62■□□□□ 0.57
TRAF4-207ENST00000461195 IGHV3OR16-10A0A075B7F0 116 aa18.61■□□□□ 0.57
TRAF4-207ENST00000461195 TRIM77I1YAP6 450 aa18.61■□□□□ 0.57
TRAF4-207ENST00000461195 GATBO75879 557 aaKnown RBP18.61■□□□□ 0.57
TRAF4-207ENST00000461195 PLATP00750 562 aa18.61■□□□□ 0.57
TRAF4-207ENST00000461195 IGHA1P01876 353 aa18.61■□□□□ 0.57
TRAF4-207ENST00000461195 IL13RA1P78552 427 aa18.61■□□□□ 0.57
TRAF4-207ENST00000461195 TUSC1Q2TAM9 212 aa18.61■□□□□ 0.57
TRAF4-207ENST00000461195 RBMS3Q6XE24 437 aaKnown RBP18.61■□□□□ 0.57
TRAF4-207ENST00000461195 RDH10Q8IZV5 341 aa18.61■□□□□ 0.57
TRAF4-207ENST00000461195 BCL6BQ8N143 479 aaPredicted RBP18.61■□□□□ 0.57
TRAF4-207ENST00000461195 PACRGLQ8N7B6 248 aa18.61■□□□□ 0.57
TRAF4-207ENST00000461195 POC1AQ8NBT0 407 aa18.61■□□□□ 0.57
TRAF4-207ENST00000461195 PELI1Q96FA3 418 aa18.61■□□□□ 0.57
TRAF4-207ENST00000461195 GAFA1Q96PS6 74 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms