RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 FBLIM1Q8WUP2 373 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 APH1BQ8WW43 257 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 SYT4Q9H2B2 425 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 OR51V1Q9H2C8 321 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 MED20Q9H944 212 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 RPRD1BQ9NQG5 326 aaKnown RBP14.04□□□□□ -0.16
TOP3A-202ENST00000461127 IGHV3OR15-7A0A075B7D8 119 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.03□□□□□ -0.16
TOP3A-202ENST00000461127 F5H5K5 113 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 PRODHO43272 600 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 NDUFB3O43676 98 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 WBP4O75554 376 aaKnown RBP14.03□□□□□ -0.16
TOP3A-202ENST00000461127 MUC1P15941 1255 aaPredicted RBP14.03□□□□□ -0.16
TOP3A-202ENST00000461127 FAHP16930 419 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 CENPAP49450 140 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 SLC25A1P53007 311 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 HIST1H3AP68431 136 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 KCNMB1Q16558 191 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 LRRC75BQ2VPJ9 315 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 HIST2H3PS2Q5TEC6 136 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 NXNL2Q5VZ03 156 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 DNM1P34Q6PK57 102 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 LIAT1Q6ZQX7 453 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 HIST2H3AQ71DI3 136 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 BCDIN3DQ7Z5W3 292 aaKnown RBP14.03□□□□□ -0.16
TOP3A-202ENST00000461127 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.03□□□□□ -0.16
TOP3A-202ENST00000461127 PNKDQ8N490 385 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 Q8N7P7 452 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 WFDC9Q8NEX5 89 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 PROKR2Q8NFJ6 384 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 BBS1Q8NFJ9 593 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 BPIFB6Q8NFQ5 453 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 OR2T4Q8NH00 348 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 CCL13Q99616 98 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 SCN3BQ9NY72 215 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 VSX1Q9NZR4 365 aaPredicted RBP14.03□□□□□ -0.16
TOP3A-202ENST00000461127 PCDHGB5Q9Y5G0 923 aa14.03□□□□□ -0.16
TOP3A-202ENST00000461127 CD300LBA8K4G0 201 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 PEX14O75381 377 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 ACSM4P0C7M7 580 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 SPI1P17947 270 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 CRABP1P29762 137 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 DLX1P56177 255 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 CSNK2BP67870 215 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 APOFQ13790 326 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 BLMHQ13867 455 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 LRRC10Q5BKY1 277 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 LCN1P1Q5VSP4 162 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 AADACL4Q5VUY2 407 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 ZNF826PQ6ZT77 177 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 FGFRL1Q8N441 504 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 TNFRSF14Q92956 283 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 NKX3-1Q99801 234 aaPredicted RBP14.02□□□□□ -0.17
TOP3A-202ENST00000461127 CITED2Q99967 270 aaPredicted RBP14.02□□□□□ -0.17
TOP3A-202ENST00000461127 DCTN5Q9BTE1 182 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 METTL8Q9H825 291 aaKnown RBP14.02□□□□□ -0.17
TOP3A-202ENST00000461127 SRA1Q9HD15 236 aaKnown RBP14.02□□□□□ -0.17
TOP3A-202ENST00000461127 C14orf119Q9NWQ9 140 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 BLOC1S6Q9UL45 172 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.02□□□□□ -0.17
TOP3A-202ENST00000461127 MYRFQ9Y2G1 1151 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 SF3B6Q9Y3B4 125 aaKnown RBP14.02□□□□□ -0.17
TOP3A-202ENST00000461127 LHFPL6Q9Y693 200 aa14.02□□□□□ -0.17
TOP3A-202ENST00000461127 GGT3PA6NGU5 568 aa14.01□□□□□ -0.17
TOP3A-202ENST00000461127 SLC1A7O00341 560 aa14.01□□□□□ -0.17
TOP3A-202ENST00000461127 LHBP01229 141 aa14.01□□□□□ -0.17
TOP3A-202ENST00000461127 GYPBP06028 91 aa14.01□□□□□ -0.17
TOP3A-202ENST00000461127 CXCR4P61073 352 aa14.01□□□□□ -0.17
TOP3A-202ENST00000461127 AANATQ16613 207 aa14.01□□□□□ -0.17
TOP3A-202ENST00000461127 SMN1Q16637 294 aaKnown RBP14.01□□□□□ -0.17
TOP3A-202ENST00000461127 WDR38Q5JTN6 314 aa14.01□□□□□ -0.17
TOP3A-202ENST00000461127 RBM48Q5RL73 367 aaKnown RBP14.01□□□□□ -0.17
TOP3A-202ENST00000461127 CORO6Q6QEF8 472 aa14.01□□□□□ -0.17
TOP3A-202ENST00000461127 MEPCEQ7L2J0 689 aaKnown RBP14.01□□□□□ -0.17
TOP3A-202ENST00000461127 OR6K6Q8NGW6 343 aa14.01□□□□□ -0.17
TOP3A-202ENST00000461127 H1FXQ92522 213 aaKnown RBP14.01□□□□□ -0.17
TOP3A-202ENST00000461127 NR1H4Q96RI1 486 aaPredicted RBP14.01□□□□□ -0.17
TOP3A-202ENST00000461127 DDOQ99489 341 aa14.01□□□□□ -0.17
TOP3A-202ENST00000461127 B9D2Q9BPU9 175 aa14.01□□□□□ -0.17
TOP3A-202ENST00000461127 YTHDF1Q9BYJ9 559 aaKnown RBP14.01□□□□□ -0.17
TOP3A-202ENST00000461127 NMNAT2Q9BZQ4 307 aa14.01□□□□□ -0.17
TOP3A-202ENST00000461127 NUAK2Q9H093 628 aa14.01□□□□□ -0.17
TOP3A-202ENST00000461127 AMBNQ9NP70 447 aa14.01□□□□□ -0.17
TOP3A-202ENST00000461127 MRPL15Q9P015 296 aaKnown RBP14.01□□□□□ -0.17
TOP3A-202ENST00000461127 WARS2Q9UGM6 360 aaKnown RBP14.01□□□□□ -0.17
TOP3A-202ENST00000461127 TPRKBQ9Y3C4 175 aa14.01□□□□□ -0.17
TOP3A-202ENST00000461127 RPL36Q9Y3U8 105 aaKnown RBP14.01□□□□□ -0.17
TOP3A-202ENST00000461127 A0A1B0GW55 424 aa14□□□□□ -0.17
TOP3A-202ENST00000461127 M0R1W7 72 aa14□□□□□ -0.17
TOP3A-202ENST00000461127 CCDC159P0C7I6 412 aa14□□□□□ -0.17
TOP3A-202ENST00000461127 DUX4L2P0CJ85 424 aa14□□□□□ -0.17
TOP3A-202ENST00000461127 DUX4L3P0CJ86 424 aa14□□□□□ -0.17
TOP3A-202ENST00000461127 DUX4L4P0CJ87 422 aa14□□□□□ -0.17
TOP3A-202ENST00000461127 DUX4L5P0CJ88 424 aa14□□□□□ -0.17
TOP3A-202ENST00000461127 DUX4L6P0CJ89 424 aa14□□□□□ -0.17
TOP3A-202ENST00000461127 DUX4L7P0CJ90 424 aa14□□□□□ -0.17
TOP3A-202ENST00000461127 CLUP10909 449 aa14□□□□□ -0.17
TOP3A-202ENST00000461127 HTR1FP30939 366 aa14□□□□□ -0.17
TOP3A-202ENST00000461127 PYCR1P32322 319 aa14□□□□□ -0.17
TOP3A-202ENST00000461127 ATP6V1E1P36543 226 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms