RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 OR51B2Q9Y5P1 312 aa2.38□□□□□ -2.03
VBP1-202ENST00000460509 TICRRQ7Z2Z1 1910 aa2.38□□□□□ -2.03
VBP1-202ENST00000460509 A0A0G2JMP0 313 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 A0A0X1KG70 313 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 VGLL3A8MV65 326 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 DFFAO00273 331 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 TTC4O95801 387 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 SLC35G6P0C7Q6 338 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 PRKACAP17612 351 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 NELFEP18615 380 aaKnown RBP2.37□□□□□ -2.03
VBP1-202ENST00000460509 IL3RAP26951 378 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 PRSS3P35030 304 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 ERFP50548 548 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 SLC35A1P78382 337 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 RPL18AQ02543 176 aaKnown RBP2.37□□□□□ -2.03
VBP1-202ENST00000460509 ADIGQ0VDE8 80 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 IGFBP7Q16270 282 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 IQCF2Q8IXL9 164 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 OR5T3Q8NGG3 340 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 HGDQ93099 445 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 TMIGD2Q96BF3 282 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 FAM19A4Q96LR4 140 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 SIKE1Q9BRV8 207 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 ARMC7Q9H6L4 198 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 PLEKHF2Q9H8W4 249 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 CYP3A43Q9HB55 503 aa2.37□□□□□ -2.03
VBP1-202ENST00000460509 ZNF608Q9ULD9 1512 aaPredicted RBP2.37□□□□□ -2.03
VBP1-202ENST00000460509 BAZ2AQ9UIF9 1905 aaKnown RBP2.36□□□□□ -2.03
VBP1-202ENST00000460509 LOC100653049A0A140TA62 436 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 CENPXA8MT69 81 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 CLDN34H7C241 214 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 KRT34O76011 436 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 SNAI1O95863 264 aaPredicted RBP2.36□□□□□ -2.03
VBP1-202ENST00000460509 GCGP01275 180 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 PFN1P07737 140 aaKnown RBP2.36□□□□□ -2.03
VBP1-202ENST00000460509 MSR1P21757 451 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 GRB2P62993 217 aaKnown RBP2.36□□□□□ -2.03
VBP1-202ENST00000460509 FAM53BQ14153 422 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 MAPRE2Q15555 327 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 SPIN3Q5JUX0 258 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 FAM131AQ6UXB0 335 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 SLC7A5P1Q8MH63 180 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 SPERTQ8NA61 448 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 CYB561A3Q8NBI2 242 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 TOP1MTQ969P6 601 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 LRRC39Q96DD0 335 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 YIPF6Q96EC8 236 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 MRPL48Q96GC5 212 aaKnown RBP2.36□□□□□ -2.03
VBP1-202ENST00000460509 RGCCQ9H4X1 137 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 CA10Q9NS85 328 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 NEURL4Q96JN8 1562 aa2.36□□□□□ -2.03
VBP1-202ENST00000460509 TRAV8-4A0A0B4J246 113 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 TRAV8-6A0A0B4J262 113 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 IGKV1-6A0A0C4DH72 117 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 ZNF701M0R085 212 aaPredicted RBP2.35□□□□□ -2.03
VBP1-202ENST00000460509 SMC2O95347 1197 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 CSTAP01040 98 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 NRASP01111 189 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 HRASP01112 189 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 KRASP01116 189 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 IGKV1-39P01597 117 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 P01737 135 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 IGKV1D-39P04432 117 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 CD9P21926 228 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 HLA-DMAP28067 261 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 CD34P28906 385 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 MPIP34949 423 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 DAOAP59103 153 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 SP6Q3SY56 376 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 LINC00336Q6ZUF6 198 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 DAW1Q8N136 415 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 OR10Z1Q8NGY1 313 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 OR52N1Q8NH53 320 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 ZNF420Q8TAQ5 688 aaPredicted RBP2.35□□□□□ -2.03
VBP1-202ENST00000460509 BAALCQ8WXS3 180 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 HAUS4Q9H6D7 363 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 ZNF391Q9UJN7 358 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 STK38LQ9Y2H1 464 aa2.35□□□□□ -2.03
VBP1-202ENST00000460509 BRCA1P38398 1863 aaKnown RBP2.35□□□□□ -2.03
VBP1-202ENST00000460509 SHANK1Q9Y566 2161 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 IGHV6-1A0A0B4J1U7 121 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 A0A0J9YYE9 177 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 ZNF879B4DU55 563 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 TRBC1P01850 177 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 KLK1P06870 262 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 CCDC172P0C7W6 258 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 PSMB2P49721 201 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 TAS2R39P59534 338 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 XIAPP98170 497 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 C2orf54Q08AI8 447 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 OR2W3Q7Z3T1 314 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 ZCCHC24Q8N2G6 241 aaKnown RBP2.34□□□□□ -2.03
VBP1-202ENST00000460509 FBXO36Q8NEA4 188 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 TMEM234Q8WY98 164 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 OR8D1Q8WZ84 308 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 RBPMSQ93062 196 aaKnown RBP2.34□□□□□ -2.03
VBP1-202ENST00000460509 DERL3Q96Q80 235 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 PDCD1LG2Q9BQ51 273 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 MS4A8Q9BY19 250 aa2.34□□□□□ -2.03
VBP1-202ENST00000460509 IL22Q9GZX6 179 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms