RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 DMRTC1Q5HYR2 192 aa19.04■□□□□ 0.64
PTPN4-208ENST00000460289 GPR157Q5UAW9 335 aa19.04■□□□□ 0.64
PTPN4-208ENST00000460289 METTL11BQ5VVY1 283 aa19.04■□□□□ 0.64
PTPN4-208ENST00000460289 HAGHLQ6PII5 290 aaPredicted RBP19.04■□□□□ 0.64
PTPN4-208ENST00000460289 ZNF573Q86YE8 665 aa19.04■□□□□ 0.64
PTPN4-208ENST00000460289 BCL6BQ8N143 479 aaPredicted RBP19.04■□□□□ 0.64
PTPN4-208ENST00000460289 FAM216BQ8N7L0 139 aa19.04■□□□□ 0.64
PTPN4-208ENST00000460289 ZDHHC22Q8N966 263 aa19.04■□□□□ 0.64
PTPN4-208ENST00000460289 STMN2Q93045 179 aa19.04■□□□□ 0.64
PTPN4-208ENST00000460289 TMIGD2Q96BF3 282 aa19.04■□□□□ 0.64
PTPN4-208ENST00000460289 DMRTB1Q96MA1 342 aa19.04■□□□□ 0.64
PTPN4-208ENST00000460289 Q96MT0 163 aa19.04■□□□□ 0.64
PTPN4-208ENST00000460289 PCGF1Q9BSM1 259 aa19.04■□□□□ 0.64
PTPN4-208ENST00000460289 CNTD2Q9H8S5 307 aa19.04■□□□□ 0.64
PTPN4-208ENST00000460289 RASL12Q9NYN1 266 aa19.04■□□□□ 0.64
PTPN4-208ENST00000460289 NLKQ9UBE8 527 aa19.04■□□□□ 0.64
PTPN4-208ENST00000460289 RPUSD1Q9UJJ7 312 aaKnown RBP19.04■□□□□ 0.64
PTPN4-208ENST00000460289 IGHV3OR16-10A0A075B7F0 116 aa19.03■□□□□ 0.64
PTPN4-208ENST00000460289 DAPL1A0PJW8 107 aa19.03■□□□□ 0.64
PTPN4-208ENST00000460289 FCN3O75636 299 aa19.03■□□□□ 0.64
PTPN4-208ENST00000460289 BAG2O95816 211 aa19.03■□□□□ 0.64
PTPN4-208ENST00000460289 ACTG1P63261 375 aa19.03■□□□□ 0.64
PTPN4-208ENST00000460289 ELF3P78545 371 aaPredicted RBP19.03■□□□□ 0.64
PTPN4-208ENST00000460289 IKZF1Q13422 519 aa19.03■□□□□ 0.64
PTPN4-208ENST00000460289 ODF4Q2M2E3 257 aa19.03■□□□□ 0.64
PTPN4-208ENST00000460289 TP53I3Q53FA7 332 aa19.03■□□□□ 0.64
PTPN4-208ENST00000460289 ZNF788Q6ZQV5 615 aa19.03■□□□□ 0.64
PTPN4-208ENST00000460289 ANGPTL6Q8NI99 470 aa19.03■□□□□ 0.64
PTPN4-208ENST00000460289 WDFY2Q96P53 400 aa19.03■□□□□ 0.64
PTPN4-208ENST00000460289 MYCBPQ99417 103 aaPredicted RBP19.03■□□□□ 0.64
PTPN4-208ENST00000460289 PLEKHA1Q9HB21 404 aa19.03■□□□□ 0.64
PTPN4-208ENST00000460289 ESM1Q9NQ30 184 aa19.03■□□□□ 0.64
PTPN4-208ENST00000460289 GPR173Q9NS66 373 aa19.03■□□□□ 0.64
PTPN4-208ENST00000460289 A0A1B0GW55 424 aa19.02■□□□□ 0.64
PTPN4-208ENST00000460289 OR2AT4A6NND4 320 aa19.02■□□□□ 0.64
PTPN4-208ENST00000460289 J3QRE1 110 aa19.02■□□□□ 0.64
PTPN4-208ENST00000460289 DUX4L2P0CJ85 424 aa19.02■□□□□ 0.64
PTPN4-208ENST00000460289 DUX4L3P0CJ86 424 aa19.02■□□□□ 0.64
PTPN4-208ENST00000460289 DUX4L4P0CJ87 422 aa19.02■□□□□ 0.64
PTPN4-208ENST00000460289 DUX4L5P0CJ88 424 aa19.02■□□□□ 0.64
PTPN4-208ENST00000460289 DUX4L6P0CJ89 424 aa19.02■□□□□ 0.64
PTPN4-208ENST00000460289 DUX4L7P0CJ90 424 aa19.02■□□□□ 0.64
PTPN4-208ENST00000460289 AMY2BP19961 511 aa19.02■□□□□ 0.64
PTPN4-208ENST00000460289 HAAOP46952 286 aa19.02■□□□□ 0.64
PTPN4-208ENST00000460289 ISL1P61371 349 aa19.02■□□□□ 0.64
PTPN4-208ENST00000460289 IL13RA1P78552 427 aa19.02■□□□□ 0.64
PTPN4-208ENST00000460289 DUX4L9Q6RFH8 374 aaPredicted RBP19.02■□□□□ 0.64
PTPN4-208ENST00000460289 ACBD7Q8N6N7 88 aa19.02■□□□□ 0.64
PTPN4-208ENST00000460289 ZMAT3Q9HA38 289 aaKnown RBP19.02■□□□□ 0.64
PTPN4-208ENST00000460289 DUX4Q9UBX2 424 aa19.02■□□□□ 0.64
PTPN4-208ENST00000460289 EXOGQ9Y2C4 368 aaKnown RBP19.02■□□□□ 0.64
PTPN4-208ENST00000460289 LOC100130705A0A1B0GUX0 176 aa19.01■□□□□ 0.63
PTPN4-208ENST00000460289 ANKRD61A6NGH8 418 aa19.01■□□□□ 0.63
PTPN4-208ENST00000460289 A6NIN4 97 aa19.01■□□□□ 0.63
PTPN4-208ENST00000460289 ACAA1P09110 424 aaPredicted RBP19.01■□□□□ 0.63
PTPN4-208ENST00000460289 UBCP0CG48 685 aaKnown RBP19.01■□□□□ 0.63
PTPN4-208ENST00000460289 MMP9P14780 707 aa19.01■□□□□ 0.63
PTPN4-208ENST00000460289 GABRB1P18505 474 aa19.01■□□□□ 0.63
PTPN4-208ENST00000460289 ARF6P62330 175 aa19.01■□□□□ 0.63
PTPN4-208ENST00000460289 UBA52P62987 128 aaKnown RBP19.01■□□□□ 0.63
PTPN4-208ENST00000460289 BAMBIQ13145 260 aa19.01■□□□□ 0.63
PTPN4-208ENST00000460289 PDCD1Q15116 288 aa19.01■□□□□ 0.63
PTPN4-208ENST00000460289 CDONQ4KMG0 1287 aa19.01■□□□□ 0.63
PTPN4-208ENST00000460289 ENTHD1Q8IYW4 607 aa19.01■□□□□ 0.63
PTPN4-208ENST00000460289 LY6G5BQ8NDX9 201 aa19.01■□□□□ 0.63
PTPN4-208ENST00000460289 RHOXF1Q8NHV9 184 aa19.01■□□□□ 0.63
PTPN4-208ENST00000460289 GCDHQ92947 438 aaPredicted RBP19.01■□□□□ 0.63
PTPN4-208ENST00000460289 MRPL48Q96GC5 212 aaKnown RBP19.01■□□□□ 0.63
PTPN4-208ENST00000460289 ACOXLQ9NUZ1 547 aa19.01■□□□□ 0.63
PTPN4-208ENST00000460289 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.01■□□□□ 0.63
PTPN4-208ENST00000460289 SLC7A11Q9UPY5 501 aa19.01■□□□□ 0.63
PTPN4-208ENST00000460289 POLDIP2Q9Y2S7 368 aa19.01■□□□□ 0.63
PTPN4-208ENST00000460289 PQLC2LA1A4F0 135 aa19■□□□□ 0.63
PTPN4-208ENST00000460289 J3QT63 122 aa19■□□□□ 0.63
PTPN4-208ENST00000460289 SERPINA3P01011 423 aa19■□□□□ 0.63
PTPN4-208ENST00000460289 SFTPBP07988 381 aa19■□□□□ 0.63
PTPN4-208ENST00000460289 PRTN3P24158 256 aa19■□□□□ 0.63
PTPN4-208ENST00000460289 GABRA2P47869 451 aa19■□□□□ 0.63
PTPN4-208ENST00000460289 C12orf54Q6X4T0 127 aa19■□□□□ 0.63
PTPN4-208ENST00000460289 PRSS35Q8N3Z0 413 aa19■□□□□ 0.63
PTPN4-208ENST00000460289 POC1AQ8NBT0 407 aa19■□□□□ 0.63
PTPN4-208ENST00000460289 C10orf35Q96D05 121 aa19■□□□□ 0.63
PTPN4-208ENST00000460289 ZNF48Q96MX3 618 aaPredicted RBP19■□□□□ 0.63
PTPN4-208ENST00000460289 GAFA1Q96PS6 74 aa19■□□□□ 0.63
PTPN4-208ENST00000460289 TBX15Q96SF7 602 aa19■□□□□ 0.63
PTPN4-208ENST00000460289 SIRPDQ9H106 197 aa19■□□□□ 0.63
PTPN4-208ENST00000460289 FAM118AQ9NWS6 357 aa19■□□□□ 0.63
PTPN4-208ENST00000460289 SLC25A10Q9UBX3 287 aaPredicted RBP19■□□□□ 0.63
PTPN4-208ENST00000460289 KPTNQ9Y664 436 aa19■□□□□ 0.63
PTPN4-208ENST00000460289 TMEM89A2RUT3 159 aa18.99■□□□□ 0.63
PTPN4-208ENST00000460289 SIGLEC5O15389 551 aa18.99■□□□□ 0.63
PTPN4-208ENST00000460289 SLC16A6O15403 523 aa18.99■□□□□ 0.63
PTPN4-208ENST00000460289 NOS1APO75052 506 aaPredicted RBP18.99■□□□□ 0.63
PTPN4-208ENST00000460289 GATBO75879 557 aaKnown RBP18.99■□□□□ 0.63
PTPN4-208ENST00000460289 PSG2P11465 335 aa18.99■□□□□ 0.63
PTPN4-208ENST00000460289 ACTA2P62736 377 aa18.99■□□□□ 0.63
PTPN4-208ENST00000460289 ACTG2P63267 376 aa18.99■□□□□ 0.63
PTPN4-208ENST00000460289 ZSCAN26Q16670 478 aa18.99■□□□□ 0.63
PTPN4-208ENST00000460289 TMEM244Q5VVB8 128 aa18.99■□□□□ 0.63
PTPN4-208ENST00000460289 BRD3OSQ6XYD6 125 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms