RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 PTGES3Q15185 160 aaKnown RBP18.68■□□□□ 0.58
PTPN4-207ENST00000460162 OR5A2Q8NGI9 324 aa18.68■□□□□ 0.58
PTPN4-207ENST00000460162 ZNF671Q8TAW3 534 aa18.68■□□□□ 0.58
PTPN4-207ENST00000460162 OR51E1Q8TCB6 317 aa18.68■□□□□ 0.58
PTPN4-207ENST00000460162 TNFRSF14Q92956 283 aa18.68■□□□□ 0.58
PTPN4-207ENST00000460162 SEMA6AQ9H2E6 1030 aa18.68■□□□□ 0.58
PTPN4-207ENST00000460162 METTL8Q9H825 291 aaKnown RBP18.68■□□□□ 0.58
PTPN4-207ENST00000460162 ENPP5Q9UJA9 477 aa18.68■□□□□ 0.58
PTPN4-207ENST00000460162 COPS3Q9UNS2 423 aa18.68■□□□□ 0.58
PTPN4-207ENST00000460162 RNF114Q9Y508 228 aa18.68■□□□□ 0.58
PTPN4-207ENST00000460162 IGKV1D-17A0A075B6S4 117 aa18.67■□□□□ 0.58
PTPN4-207ENST00000460162 TRBV23-1A0A0A0MS06 115 aa18.67■□□□□ 0.58
PTPN4-207ENST00000460162 A0A1W2PQ09 198 aa18.67■□□□□ 0.58
PTPN4-207ENST00000460162 KCNAB3O43448 404 aa18.67■□□□□ 0.58
PTPN4-207ENST00000460162 DHRS3O75911 302 aa18.67■□□□□ 0.58
PTPN4-207ENST00000460162 TFF1P04155 84 aa18.67■□□□□ 0.58
PTPN4-207ENST00000460162 NDUFB7P17568 137 aa18.67■□□□□ 0.58
PTPN4-207ENST00000460162 SRSF4Q08170 494 aaKnown RBP18.67■□□□□ 0.58
PTPN4-207ENST00000460162 KLRD1Q13241 179 aa18.67■□□□□ 0.58
PTPN4-207ENST00000460162 TAF9Q16594 264 aa18.67■□□□□ 0.58
PTPN4-207ENST00000460162 PLCXD3Q63HM9 321 aa18.67■□□□□ 0.58
PTPN4-207ENST00000460162 LINC01006Q8NI28 216 aa18.67■□□□□ 0.58
PTPN4-207ENST00000460162 AQP3Q92482 292 aa18.67■□□□□ 0.58
PTPN4-207ENST00000460162 MNTQ99583 582 aa18.67■□□□□ 0.58
PTPN4-207ENST00000460162 TTTY10Q9BZA0 68 aa18.67■□□□□ 0.58
PTPN4-207ENST00000460162 IKZF2Q9UKS7 526 aa18.67■□□□□ 0.58
PTPN4-207ENST00000460162 GSC2O15499 205 aa18.66■□□□□ 0.58
PTPN4-207ENST00000460162 PRKYO43930 277 aa18.66■□□□□ 0.58
PTPN4-207ENST00000460162 MTRF1O75570 445 aaKnown RBP18.66■□□□□ 0.58
PTPN4-207ENST00000460162 PSG2P11465 335 aa18.66■□□□□ 0.58
PTPN4-207ENST00000460162 FAHP16930 419 aa18.66■□□□□ 0.58
PTPN4-207ENST00000460162 GABRA2P47869 451 aa18.66■□□□□ 0.58
PTPN4-207ENST00000460162 DAPP51397 102 aa18.66■□□□□ 0.58
PTPN4-207ENST00000460162 MFGE8Q08431 387 aaPredicted RBP18.66■□□□□ 0.58
PTPN4-207ENST00000460162 ACSM1Q08AH1 577 aa18.66■□□□□ 0.58
PTPN4-207ENST00000460162 BLMHQ13867 455 aa18.66■□□□□ 0.58
PTPN4-207ENST00000460162 HAGHLQ6PII5 290 aaPredicted RBP18.66■□□□□ 0.58
PTPN4-207ENST00000460162 TMEM185AQ8NFB2 350 aa18.66■□□□□ 0.58
PTPN4-207ENST00000460162 OR5K1Q8NHB7 308 aa18.66■□□□□ 0.58
PTPN4-207ENST00000460162 BCAS4Q8TDM0 211 aa18.66■□□□□ 0.58
PTPN4-207ENST00000460162 UTP4Q969X6 686 aaKnown RBP18.66■□□□□ 0.58
PTPN4-207ENST00000460162 RASL12Q9NYN1 266 aa18.66■□□□□ 0.58
PTPN4-207ENST00000460162 PIGLQ9Y2B2 252 aa18.66■□□□□ 0.58
PTPN4-207ENST00000460162 SLC22A31A6NKX4 558 aa18.65■□□□□ 0.58
PTPN4-207ENST00000460162 TIMM23O14925 209 aa18.65■□□□□ 0.58
PTPN4-207ENST00000460162 CLPXO76031 633 aa18.65■□□□□ 0.58
PTPN4-207ENST00000460162 PAHP00439 452 aa18.65■□□□□ 0.58
PTPN4-207ENST00000460162 TTRP02766 147 aa18.65■□□□□ 0.58
PTPN4-207ENST00000460162 SAA4P35542 130 aa18.65■□□□□ 0.58
PTPN4-207ENST00000460162 UBE2E1P51965 193 aa18.65■□□□□ 0.58
PTPN4-207ENST00000460162 DLX1P56177 255 aa18.65■□□□□ 0.58
PTPN4-207ENST00000460162 SMIM21Q3B7S5 101 aa18.65■□□□□ 0.58
PTPN4-207ENST00000460162 NXNL2Q5VZ03 156 aa18.65■□□□□ 0.58
PTPN4-207ENST00000460162 DHRS7BQ6IAN0 325 aaPredicted RBP18.65■□□□□ 0.58
PTPN4-207ENST00000460162 MOB3CQ70IA8 216 aa18.65■□□□□ 0.58
PTPN4-207ENST00000460162 ZSCAN4Q8NAM6 433 aaPredicted RBP18.65■□□□□ 0.58
PTPN4-207ENST00000460162 ZNRF1Q8ND25 227 aa18.65■□□□□ 0.58
PTPN4-207ENST00000460162 SDSLQ96GA7 329 aa18.65■□□□□ 0.58
PTPN4-207ENST00000460162 KRT84Q9NSB2 600 aa18.65■□□□□ 0.58
PTPN4-207ENST00000460162 MAB21L2Q9Y586 359 aa18.65■□□□□ 0.58
PTPN4-207ENST00000460162 MEIOCA2RUB1 952 aa18.64■□□□□ 0.57
PTPN4-207ENST00000460162 LOC110117498-PIK3R3F6TDL0 507 aa18.64■□□□□ 0.57
PTPN4-207ENST00000460162 M0QZ24 198 aa18.64■□□□□ 0.57
PTPN4-207ENST00000460162 DYNC1I1O14576 645 aa18.64■□□□□ 0.57
PTPN4-207ENST00000460162 SRSF10O75494 262 aaKnown RBP18.64■□□□□ 0.57
PTPN4-207ENST00000460162 PROK1P58294 105 aa18.64■□□□□ 0.57
PTPN4-207ENST00000460162 CXCR4P61073 352 aa18.64■□□□□ 0.57
PTPN4-207ENST00000460162 PRB3Q04118 309 aaPredicted RBP18.64■□□□□ 0.57
PTPN4-207ENST00000460162 ZNF684Q5T5D7 378 aa18.64■□□□□ 0.57
PTPN4-207ENST00000460162 ZNF322Q6U7Q0 402 aaPredicted RBP18.64■□□□□ 0.57
PTPN4-207ENST00000460162 MEPCEQ7L2J0 689 aaKnown RBP18.64■□□□□ 0.57
PTPN4-207ENST00000460162 POC1AQ8NBT0 407 aa18.64■□□□□ 0.57
PTPN4-207ENST00000460162 OR5D13Q8NGL4 314 aa18.64■□□□□ 0.57
PTPN4-207ENST00000460162 OR5R1Q8NH85 324 aa18.64■□□□□ 0.57
PTPN4-207ENST00000460162 DUS3LQ96G46 650 aaKnown RBP18.64■□□□□ 0.57
PTPN4-207ENST00000460162 ELL3Q9HB65 397 aaPredicted RBP18.64■□□□□ 0.57
PTPN4-207ENST00000460162 VWFP04275 2813 aa18.63■□□□□ 0.57
PTPN4-207ENST00000460162 NRASP01111 189 aa18.63■□□□□ 0.57
PTPN4-207ENST00000460162 ACTR3P61158 418 aa18.63■□□□□ 0.57
PTPN4-207ENST00000460162 BCL2L15Q5TBC7 163 aa18.63■□□□□ 0.57
PTPN4-207ENST00000460162 AADACL4Q5VUY2 407 aa18.63■□□□□ 0.57
PTPN4-207ENST00000460162 SLX4IPQ5VYV7 408 aa18.63■□□□□ 0.57
PTPN4-207ENST00000460162 TMEM42Q69YG0 159 aa18.63■□□□□ 0.57
PTPN4-207ENST00000460162 ACP7Q6ZNF0 438 aa18.63■□□□□ 0.57
PTPN4-207ENST00000460162 Q6ZSV7 163 aa18.63■□□□□ 0.57
PTPN4-207ENST00000460162 SLC35F2Q8IXU6 374 aa18.63■□□□□ 0.57
PTPN4-207ENST00000460162 TMEM163Q8TC26 289 aa18.63■□□□□ 0.57
PTPN4-207ENST00000460162 C16orf95Q9H693 158 aa18.63■□□□□ 0.57
PTPN4-207ENST00000460162 ADGRL4Q9HBW9 690 aa18.63■□□□□ 0.57
PTPN4-207ENST00000460162 GTF2A1LQ9UNN4 478 aa18.63■□□□□ 0.57
PTPN4-207ENST00000460162 R4GMQ9 66 aa18.63■□□□□ 0.57
PTPN4-207ENST00000460162 CMYA5Q8N3K9 4069 aa18.63■□□□□ 0.57
PTPN4-207ENST00000460162 WNK1Q9H4A3 2382 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 A0A1W2PRD5 423 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 A0A1W2PRF3 423 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 A0A1W2PRM7 423 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 DHRS7CA6NNS2 312 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 ZAR1LA6NP61 321 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 J3QT63 122 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 M0R129 80 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms