RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 ZNF404Q494X3 552 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 WDR82Q6UXN9 313 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 TMPRSS11AQ6ZMR5 421 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 Q6ZSR3 168 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 IL17RELQ6ZVW7 336 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 AHSA2Q719I0 299 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 KRT74Q7RTS7 529 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 CCDC54Q8NEL0 328 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 OR10AC1Q8NH08 325 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 TRMT10AQ8TBZ6 339 aaKnown RBP8.44□□□□□ -1.06
RFX3-210ENST00000457373 NPRL2Q8WTW4 380 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 FBLIM1Q8WUP2 373 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 TMEM186Q96B77 213 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 JAM3Q9BX67 310 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 PLCXD1Q9NUJ7 323 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 HIF1ANQ9NWT6 349 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 ERVK-18Q9QC07 812 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 CLEC2DQ9UHP7 191 aa8.44□□□□□ -1.06
RFX3-210ENST00000457373 DIMT1Q9UNQ2 313 aaKnown RBP8.44□□□□□ -1.06
RFX3-210ENST00000457373 CAB39Q9Y376 341 aaPredicted RBP8.44□□□□□ -1.06
RFX3-210ENST00000457373 RRP15Q9Y3B9 282 aaKnown RBP8.44□□□□□ -1.06
RFX3-210ENST00000457373 FLNAP21333 2647 aaKnown RBP8.43□□□□□ -1.06
RFX3-210ENST00000457373 TRBV23-1A0A0A0MS06 115 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 TRAV38-1A0A0B4J264 116 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 TRBV2A0A0J9YWF9 115 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 FAM230AA0A1W2PPH8 454 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 EFCAB10A6NFE3 127 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 OOEPA6NGQ2 149 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 OR5B21A6NL26 309 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 OR4C45A6NMZ5 311 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 DHRS7CA6NNS2 312 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 AKR7A2O43488 359 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 CRLF1O75462 422 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 FOXH1O75593 365 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 SERPINA3P01011 423 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 LHBP01229 141 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 GYPAP02724 150 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 CCDC159P0C7I6 412 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 PIPP12273 146 aaPredicted RBP8.43□□□□□ -1.06
RFX3-210ENST00000457373 ZNF12P17014 697 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 ZNF20P17024 532 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 HOXB4P17483 251 aaPredicted RBP8.43□□□□□ -1.06
RFX3-210ENST00000457373 ZFP36P26651 326 aaKnown RBP8.43□□□□□ -1.06
RFX3-210ENST00000457373 ID3Q02535 119 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 MRPL28Q13084 256 aaKnown RBP8.43□□□□□ -1.06
RFX3-210ENST00000457373 CR1LQ2VPA4 569 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 FAM76BQ5HYJ3 339 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 C6orf141Q5SZD1 244 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 TMEM42Q69YG0 159 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 HAGHLQ6PII5 290 aaPredicted RBP8.43□□□□□ -1.06
RFX3-210ENST00000457373 DCDC5Q6ZRR9 648 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 C1orf229Q6ZS94 237 aaPredicted RBP8.43□□□□□ -1.06
RFX3-210ENST00000457373 EGFL6Q8IUX8 553 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 OR8B3Q8NGG8 313 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 OR13C3Q8NGS6 347 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 OR10Z1Q8NGY1 313 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 OR5AK2Q8NH90 309 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 FGGYQ96C11 551 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 SEH1LQ96EE3 360 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 NEIL1Q96FI4 390 aaPredicted RBP8.43□□□□□ -1.06
RFX3-210ENST00000457373 OR8B2Q96RD0 313 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 BEX2Q9BXY8 128 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 COMMD4Q9H0A8 199 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 SHARPINQ9H0F6 387 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 TLNRD1Q9H1K6 362 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 OR51I2Q9H344 312 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 CNOT2Q9NZN8 540 aaKnown RBP8.43□□□□□ -1.06
RFX3-210ENST00000457373 MIOXQ9UGB7 285 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 PSORS1C1Q9UIG5 152 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 HHLA2Q9UM44 414 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 SLC7A11Q9UPY5 501 aa8.43□□□□□ -1.06
RFX3-210ENST00000457373 ANKRD61A6NGH8 418 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 SRRM5B3KS81 715 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 PTGES3LE9PB15 166 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 F5H0A9 414 aaPredicted RBP8.42□□□□□ -1.06
RFX3-210ENST00000457373 SLC1A7O00341 560 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 PHF1O43189 567 aaPredicted RBP8.42□□□□□ -1.06
RFX3-210ENST00000457373 ADAM20O43506 726 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 RHBDL1O75783 438 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 GATBO75879 557 aaKnown RBP8.42□□□□□ -1.06
RFX3-210ENST00000457373 INMTO95050 263 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 ISG15P05161 165 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 MYF6P23409 242 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 GLRA1P23415 457 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 C21orf33P30042 268 aaPredicted RBP8.42□□□□□ -1.06
RFX3-210ENST00000457373 VHLP40337 213 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 HAAOP46952 286 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 HSPA13P48723 471 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 TGM4P49221 684 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 RIPPLY3P57055 190 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 GNB2P62879 340 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 UBE2V2Q15819 145 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 KCNJ8Q15842 424 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 CHRFAM7AQ494W8 412 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 ESCO2Q56NI9 601 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 FAM120AOSQ5T036 256 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 XAF1Q6GPH4 301 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 FAHD2BQ6P2I3 314 aaPredicted RBP8.42□□□□□ -1.06
RFX3-210ENST00000457373 RPL22L1Q6P5R6 122 aaKnown RBP8.42□□□□□ -1.06
RFX3-210ENST00000457373 ANGPTL5Q86XS5 388 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms