RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 RFNGQ9Y644 331 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 IGKV1D-8A0A087WSZ0 117 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 SNAPC5O75971 98 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 SFTPBP07988 381 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 ZNF20P17024 532 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 RAB13P51153 203 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 MMP16P51512 607 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 ZNF121P58317 390 aaPredicted RBP10.89□□□□□ -0.67
LINC00959-201ENST00000456581 RPL7L1Q6DKI1 246 aaKnown RBP10.89□□□□□ -0.67
LINC00959-201ENST00000456581 KLHL24Q6TFL4 600 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 FAM57BQ71RH2 274 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 OR13G1Q8NGZ3 307 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 OR6S1Q8NH40 331 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 THRSPQ92748 146 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 ISOC2Q96AB3 205 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 GPER1Q99527 375 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 HDHD3Q9BSH5 251 aaPredicted RBP10.89□□□□□ -0.67
LINC00959-201ENST00000456581 A0A1B0GV50 99 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 A0A1B0GW55 424 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 TMEM14DPA8MWL7 114 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 ZIC3O60481 467 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 CDC14BO60729 498 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 LRP3O75074 770 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 DUX4L2P0CJ85 424 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 DUX4L3P0CJ86 424 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 DUX4L4P0CJ87 422 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 DUX4L5P0CJ88 424 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 DUX4L6P0CJ89 424 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 DUX4L7P0CJ90 424 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 CD59P13987 128 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 RAB6AP20340 208 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 HSD11B1P28845 292 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 CLRN1P58418 232 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 SNRPEP62304 92 aaKnown RBP10.88□□□□□ -0.67
LINC00959-201ENST00000456581 PDZK1IP1Q13113 114 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 ARFRP1Q13795 201 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 EXT1Q16394 746 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 OPN5Q6U736 354 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 DBX2Q6ZNG2 339 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 SVBPQ8N300 66 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 ZDHHC22Q8N966 263 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 OR5D14Q8NGL3 314 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 TERB2Q8NHR7 220 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 RTBDNQ9BSG5 229 aaPredicted RBP10.88□□□□□ -0.67
LINC00959-201ENST00000456581 C20orf24Q9BUV8 137 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 MRPL13Q9BYD1 178 aaKnown RBP10.88□□□□□ -0.67
LINC00959-201ENST00000456581 METTL8Q9H825 291 aaKnown RBP10.88□□□□□ -0.67
LINC00959-201ENST00000456581 DUX4Q9UBX2 424 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 PTPRZ1P23471 2315 aaPredicted RBP10.88□□□□□ -0.67
LINC00959-201ENST00000456581 IGKV1-9A0A0C4DH69 117 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 TEX13DA0A0J9YY54 714 aaPredicted RBP10.88□□□□□ -0.67
LINC00959-201ENST00000456581 C9orf172C9J069 976 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 FGF16O43320 207 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 EIF3GO75821 320 aaKnown RBP eCLIP10.88□□□□□ -0.67
LINC00959-201ENST00000456581 H2AFB1P0C5Y9 115 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 RFPL3SP0C7P2 107 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 CD79AP11912 226 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 TPT1P13693 172 aaKnown RBP10.88□□□□□ -0.67
LINC00959-201ENST00000456581 MLF1P58340 268 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 SPEM2Q0P670 501 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 YRDCQ86U90 279 aaKnown RBP10.88□□□□□ -0.67
LINC00959-201ENST00000456581 PHYHIPLQ96FC7 376 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 UQCC1Q9NVA1 299 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 KMT2EQ8IZD2 1858 aa10.88□□□□□ -0.67
LINC00959-201ENST00000456581 ZNF292O60281 2723 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 DIDO1Q9BTC0 2240 aaKnown RBP10.87□□□□□ -0.67
LINC00959-201ENST00000456581 LINC00587B1AMM8 73 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 BPNT1O95861 308 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 ACAA1P09110 424 aaPredicted RBP10.87□□□□□ -0.67
LINC00959-201ENST00000456581 JMJD7P0C870 316 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 PGA4P0DJD7 388 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 PGA3P0DJD8 388 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 PCK2Q16822 640 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 SEMA6DQ8NFY4 1073 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 NANPQ8TBE9 248 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 M1APQ8TC57 530 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 CACNA1GO43497 2377 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 F8VVB4 439 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 F8VWA3 439 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 NAT2P11245 290 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 LIFP15018 202 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 ZNF43P17038 809 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 HLA-GP17693 338 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 RFC3P40938 356 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 FHITP49789 147 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 CLDN17P56750 224 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 AADACL3Q5VUY0 350 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 DHRS13Q6UX07 377 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 C6orf15Q6UXA7 325 aaPredicted RBP10.87□□□□□ -0.67
LINC00959-201ENST00000456581 ASB13Q8WXK3 278 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 ZNF385AQ96PM9 386 aaKnown RBP10.87□□□□□ -0.67
LINC00959-201ENST00000456581 NAA11Q9BSU3 229 aaPredicted RBP10.87□□□□□ -0.67
LINC00959-201ENST00000456581 TMEM59Q9BXS4 323 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 ELL3Q9HB65 397 aaPredicted RBP10.87□□□□□ -0.67
LINC00959-201ENST00000456581 ATPIF1Q9UII2 106 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 FLVCR1Q9Y5Y0 555 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 MGAQ8IWI9 3026 aa10.87□□□□□ -0.67
LINC00959-201ENST00000456581 A0A0A6YYH2 397 aa10.86□□□□□ -0.67
LINC00959-201ENST00000456581 A6NJ64 397 aa10.86□□□□□ -0.67
LINC00959-201ENST00000456581 B4E171 279 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms