RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 BIDP55957 195 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 ZNF574Q6ZN55 896 aaPredicted RBP12.06□□□□□ -0.48
PTPRE-204ENST00000455661 TMEM182Q6ZP80 229 aaPredicted RBP12.06□□□□□ -0.48
PTPRE-204ENST00000455661 DOK3Q7L591 496 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 SPRED2Q7Z698 418 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 OR10D4PQ8NGN7 298 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 TSLPQ969D9 159 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 GALNT14Q96FL9 552 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 SHDQ96IW2 340 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 CYYR1Q96J86 154 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 NELFAQ9H3P2 528 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 CHST11Q9NPF2 352 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 RRP8O43159 456 aaKnown RBP12.06□□□□□ -0.48
PTPRE-204ENST00000455661 HIST1H1BP16401 226 aaKnown RBP12.06□□□□□ -0.48
PTPRE-204ENST00000455661 PPP1CCP36873 323 aaKnown RBP12.06□□□□□ -0.48
PTPRE-204ENST00000455661 ZNF121P58317 390 aaPredicted RBP12.06□□□□□ -0.48
PTPRE-204ENST00000455661 CD81P60033 236 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 IL13RA2Q14627 380 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 WDFY1Q8IWB7 410 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 C9orf40Q8IXQ3 194 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 OR13H1Q8NG92 308 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 GTF3AQ92664 365 aaKnown RBP12.06□□□□□ -0.48
PTPRE-204ENST00000455661 RARRES2Q99969 163 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 SOX7Q9BT81 388 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 EMC6Q9BV81 110 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 A0A087WWC5 75 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 RBFOX3A6NFN3 312 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 H3BQ15 152 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 PPP1R2P9O14990 202 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 CA11O75493 328 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 UBE2KP61086 200 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 ABCA11PQ4W5N1 156 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 HIKESHIQ53FT3 197 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 OR5D18Q8NGL1 313 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 STT3BQ8TCJ2 826 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 C14orf144Q96I85 54 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 PIGQQ9BRB3 760 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 SOHLH2Q9NX45 425 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 COPS7AQ9UBW8 275 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 HS3ST3A1Q9Y663 406 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 ELOA3CA0A087WX78 387 aaPredicted RBP12.05□□□□□ -0.48
PTPRE-204ENST00000455661 NSG1A0A0A6YYJ2 146 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 TLCD2A6NGC4 264 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 FOXI3A8MTJ6 420 aaPredicted RBP12.05□□□□□ -0.48
PTPRE-204ENST00000455661 ZNF587BE7ETH6 402 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 ST8SIA5O15466 376 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 XRCC2O43543 280 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 DIRAS3O95661 229 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 GABRA4P48169 554 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 PIGPP57054 158 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 NKX6-1P78426 367 aaPredicted RBP12.05□□□□□ -0.48
PTPRE-204ENST00000455661 C1orf61Q13536 156 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 KISS1Q15726 138 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 THEM4Q5T1C6 240 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 STX12Q86Y82 276 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 APCDD1LQ8NCL9 501 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 WWTR1Q9GZV5 400 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 PISDQ9UG56 409 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 LHFPL6Q9Y693 200 aa12.05□□□□□ -0.48
PTPRE-204ENST00000455661 MED19A0JLT2 244 aaPredicted RBP12.04□□□□□ -0.48
PTPRE-204ENST00000455661 ZNF727A8MUV8 499 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 B4DGG1 531 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 K7N7A8 449 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 RAMP1O60894 148 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 APOBEC1P41238 236 aaKnown RBP12.04□□□□□ -0.48
PTPRE-204ENST00000455661 CLRN1P58418 232 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 GABREP78334 506 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 DNLZQ5SXM8 178 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 FBXW12Q6X9E4 464 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 RNASE11Q8TAA1 199 aaKnown RBP12.04□□□□□ -0.48
PTPRE-204ENST00000455661 HPSE2Q8WWQ2 592 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 DDIT4LQ96D03 193 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 RAB39BQ96DA2 213 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 MARS2Q96GW9 593 aaKnown RBP12.04□□□□□ -0.48
PTPRE-204ENST00000455661 RHOVQ96L33 236 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 PRDM13Q9H4Q3 707 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 ELL3Q9HB65 397 aaPredicted RBP12.04□□□□□ -0.48
PTPRE-204ENST00000455661 C2orf16Q68DN1 1984 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.04□□□□□ -0.48
PTPRE-204ENST00000455661 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.04□□□□□ -0.48
PTPRE-204ENST00000455661 CXorf65A6NEN9 183 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 ST8SIA3O43173 380 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 HEXBP07686 556 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 ZNF17P17021 662 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 CCL1P22362 96 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 DUSP1P28562 367 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 NHLH2Q02577 135 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 EIF3IQ13347 325 aaKnown RBP12.04□□□□□ -0.48
PTPRE-204ENST00000455661 ELOBQ15370 118 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 RSU1Q15404 277 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 UBE2V2Q15819 145 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 CDPF1Q6NVV7 123 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 FAM57BQ71RH2 274 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 ZNF283Q8N7M2 679 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 SSC4DQ8WTU2 575 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 Q8WTZ3 238 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 ST8SIA1Q92185 356 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 CPNE4Q96A23 557 aaPredicted RBP12.04□□□□□ -0.48
PTPRE-204ENST00000455661 NTNG2Q96CW9 530 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 NAA60Q9H7X0 242 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms