RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 FOXRED1Q96CU9 486 aaPredicted RBP6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 SDSLQ96GA7 329 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 BTBD10Q9BSF8 475 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 DGCR6LQ9BY27 220 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 WDR13Q9H1Z4 485 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 CMC2Q9NRP2 79 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 USE1Q9NZ43 259 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 DNAJC27Q9NZQ0 273 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 VGLL3A8MV65 326 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 AKR7A2O43488 359 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 GASTP01350 101 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 LYNP07948 512 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 SELLP14151 372 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 ANOS1P23352 680 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 DCTDP32321 178 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 GPM6AP51674 278 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 ERVFRD-1P60508 538 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 RPL31P62899 125 aaKnown RBP6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 ELF3P78545 371 aaPredicted RBP6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 PRB3Q04118 309 aaPredicted RBP6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 LY6EQ16553 131 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 CEACAM21Q3KPI0 293 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 ZBTB37Q5TC79 503 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 LINC01590Q5TEZ4 76 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 LCN1P1Q5VSP4 162 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 ZNF770Q6IQ21 691 aaPredicted RBP6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 CRIP3Q6Q6R5 217 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 C16orf89Q6UX73 402 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 KRT74Q7RTS7 529 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 THAP5Q7Z6K1 395 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 CALHM1Q8IU99 346 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 Q8N2B8 174 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 PNKDQ8N490 385 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 ZNF561Q8N587 486 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 OR5A2Q8NGI9 324 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 OR8D4Q8NGM9 314 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 RPS4Y2Q8TD47 263 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 OTULINQ96BN8 352 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 SEH1LQ96EE3 360 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 EAF1Q96JC9 268 aaPredicted RBP6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 TEX12Q9BXU0 123 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 MYLK2Q9H1R3 596 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 OR51I2Q9H344 312 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 MAGIXQ9H6Y5 334 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 REEP1Q9H902 201 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 ABCB10Q9NRK6 738 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 FOXJ3Q9UPW0 622 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 POLDIP2Q9Y2S7 368 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 SIGLEC9Q9Y336 463 aa6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 TBL2Q9Y4P3 447 aaKnown RBP6.52□□□□□ -1.37
NIF3L1-209ENST00000454952 IGKV1D-17A0A075B6S4 117 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 A0A0U1RQV5 110 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 ZNF732B4DXR9 585 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 GSC2O15499 205 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 PRODHO43272 600 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 MTRF1O75570 445 aaKnown RBP6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 SOX14O95416 240 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 RBP4P02753 201 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 CLUP10909 449 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 PSG2P11465 335 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 ATF4P18848 351 aaPredicted RBP6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 ACKR3P25106 362 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 MAGEA2P43356 314 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 MNAT1P51948 309 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 DLX1P56177 255 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 RIPPLY1Q0D2K3 151 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 CNN3Q15417 329 aaKnown RBP6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 MICAQ29983 383 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 HCP5Q6MZN7 132 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 CD300LDQ6UXZ3 194 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 COMMD2Q86X83 199 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 MKXQ8IYA7 352 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 C11orf44Q8N8P7 122 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 ZNRF1Q8ND25 227 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 OR4Q3Q8NH05 313 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 OTOSQ8NHW6 89 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 THEM6Q8WUY1 208 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 HPSE2Q8WWQ2 592 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 R3HDM4Q96D70 268 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 AJUBAQ96IF1 538 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 CDRT15Q96T59 188 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 NKX3-1Q99801 234 aaPredicted RBP6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 PRSS22Q9GZN4 317 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 C1orf21Q9H246 121 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 MUC13Q9H3R2 512 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 MED4Q9NPJ6 270 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 ARMC1Q9NVT9 282 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 ACTR3BQ9P1U1 418 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 ZNF319Q9P2F9 582 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 ZNF222Q9UK12 451 aa6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 SAMHD1Q9Y3Z3 626 aaKnown RBP6.51□□□□□ -1.37
NIF3L1-209ENST00000454952 CMYA5Q8N3K9 4069 aa6.5□□□□□ -1.37
NIF3L1-209ENST00000454952 ARRDC5A6NEK1 342 aa6.5□□□□□ -1.37
NIF3L1-209ENST00000454952 PRR23D1E9PI22 279 aaPredicted RBP6.5□□□□□ -1.37
NIF3L1-209ENST00000454952 H3BN98 237 aa6.5□□□□□ -1.37
NIF3L1-209ENST00000454952 E2F6O75461 281 aa6.5□□□□□ -1.37
NIF3L1-209ENST00000454952 HMGN1P05114 100 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms