RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 TSLPQ969D9 159 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 PPP1R14AQ96A00 147 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 FGGYQ96C11 551 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 MIEN1Q9BRT3 115 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 NAGKQ9UJ70 344 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 OSGIN2Q9Y236 505 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 MRPS23Q9Y3D9 190 aaKnown RBP7.62□□□□□ -1.19
LSM5-208ENST00000450169 Q9Y3F1 56 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 YIPF1Q9Y548 306 aa7.62□□□□□ -1.19
LSM5-208ENST00000450169 HEATR5BQ9P2D3 2071 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 A0A1W2PPV9 198 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 PRSS47A8MTI9 375 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 GPR137BO60478 399 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 DUSP11O75319 330 aaKnown RBP7.61□□□□□ -1.19
LSM5-208ENST00000450169 KLF8O95600 359 aaPredicted RBP7.61□□□□□ -1.19
LSM5-208ENST00000450169 PNPP00491 289 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 TIMP1P01033 207 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 UMODP07911 640 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 BCL6P41182 706 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 TFPI2P48307 235 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 DNASE1L1P49184 302 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 SELENOTP62341 195 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 RPS4XP62701 263 aaKnown RBP7.61□□□□□ -1.19
LSM5-208ENST00000450169 SGCGQ13326 291 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 UNC119Q13432 240 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 GPR18Q14330 331 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 MEP1BQ16820 701 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 CLLU1OSQ5K130 101 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 ZNF66Q6ZN08 573 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 Q6ZNB5 142 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 RTN4RL2Q86UN3 420 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 ZNF547Q8IVP9 402 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 IFI44Q8TCB0 444 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 GPX7Q96SL4 187 aaPredicted RBP7.61□□□□□ -1.19
LSM5-208ENST00000450169 ZNF700Q9H0M5 742 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 MSL2Q9HCI7 577 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 AK3Q9UIJ7 227 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 TCF20Q9UGU0 1960 aaKnown RBP7.61□□□□□ -1.19
LSM5-208ENST00000450169 A0A1W2PN81 502 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 CDC14CA4D256 554 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 H7C1C5 153 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 K7EP13 123 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 CBR3O75828 277 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 AHSA1O95433 338 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 KNG1P01042 644 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 IFNA21P01568 189 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 CHRNB4P30926 498 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 CHRNA7P36544 502 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 THPOP40225 353 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 ACAA2P42765 397 aaKnown RBP7.61□□□□□ -1.19
LSM5-208ENST00000450169 LCN6P62502 163 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 SP3Q02447 781 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 SLC17A1Q14916 467 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 ZIC1Q15915 447 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 CHRFAM7AQ494W8 412 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 GPR157Q5UAW9 335 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 FCRL6Q6DN72 434 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 LRP11Q86VZ4 500 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 ZFP62Q8NB50 900 aaPredicted RBP7.61□□□□□ -1.19
LSM5-208ENST00000450169 OR5H2Q8NGV7 314 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 OR13G1Q8NGZ3 307 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 IGSF21Q96ID5 467 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 ALKBH3Q96Q83 286 aaPredicted RBP7.61□□□□□ -1.19
LSM5-208ENST00000450169 OR8B4Q96RC9 309 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 SLC22A12Q96S37 553 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 TPSD1Q9BZJ3 242 aa7.61□□□□□ -1.19
LSM5-208ENST00000450169 KIAA1549LQ6ZVL6 1849 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 ARID1AO14497 2285 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 IGKV1-8A0A0C4DH67 115 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 TRBV11-1A0A0K0K1C0 115 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 NKX6-3A6NJ46 265 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 H7C4K7 107 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 RRP8O43159 456 aaKnown RBP7.6□□□□□ -1.19
LSM5-208ENST00000450169 TSPAN2O60636 221 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 KAT7O95251 611 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 OR3A2P47893 321 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 PTTG1IPP53801 180 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 KLF3P57682 345 aaPredicted RBP7.6□□□□□ -1.19
LSM5-208ENST00000450169 ZNF117Q03924 483 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 MFGE8Q08431 387 aaPredicted RBP7.6□□□□□ -1.19
LSM5-208ENST00000450169 ITPRIPL2Q3MIP1 535 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 RNF44Q7L0R7 432 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 SMIM15Q7Z3B0 74 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 LHFPL1Q86WI0 220 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 GBGT1Q8N5D6 347 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 OR2G3Q8NGZ4 309 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 OTOSQ8NHW6 89 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 WFIKKN1Q96NZ8 548 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 TP53RKQ96S44 253 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 C20orf144Q9BQM9 153 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 ABHD14AQ9BUJ0 271 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 CNTD2Q9H8S5 307 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 P4HTMQ9NXG6 502 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 RHBDD3Q9Y3P4 386 aa7.6□□□□□ -1.19
LSM5-208ENST00000450169 FAM230AA0A1W2PPH8 454 aa7.59□□□□□ -1.19
LSM5-208ENST00000450169 A0A1W2PQU0 124 aa7.59□□□□□ -1.19
LSM5-208ENST00000450169 ZNF705FA8MVS1 300 aaPredicted RBP7.59□□□□□ -1.19
LSM5-208ENST00000450169 ALG1L2C9J202 215 aa7.59□□□□□ -1.19
LSM5-208ENST00000450169 CCL25O15444 150 aa7.59□□□□□ -1.19
LSM5-208ENST00000450169 GHRHP01286 108 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms