RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 NRASP01111 189 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 KRT8P05787 483 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 CRYBA1P05813 215 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 ATP6V1E1P36543 226 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 DMRTC1Q5HYR2 192 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 HAGHLQ6PII5 290 aaPredicted RBP12.6□□□□□ -0.39
CHD3-205ENST00000449744 SHISA2Q6UWI4 295 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 ZNF788Q6ZQV5 615 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 PLEKHG7Q6ZR37 379 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 PDZD9Q8IXQ8 264 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 ELMOD2Q8IZ81 293 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 YIPF7Q8N8F6 280 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 LY6G5BQ8NDX9 201 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 ANGPTL6Q8NI99 470 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 GAFA1Q96PS6 74 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 TBX5Q99593 518 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 DCTN5Q9BTE1 182 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 SLC25A10Q9UBX3 287 aaPredicted RBP12.6□□□□□ -0.39
CHD3-205ENST00000449744 OAZ3Q9UMX2 235 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 SNX5Q9Y5X3 404 aa12.6□□□□□ -0.39
CHD3-205ENST00000449744 SIGLEC5O15389 551 aa12.59□□□□□ -0.39
CHD3-205ENST00000449744 SRSF10O75494 262 aaKnown RBP12.59□□□□□ -0.39
CHD3-205ENST00000449744 RPP14O95059 124 aaKnown RBP12.59□□□□□ -0.39
CHD3-205ENST00000449744 MELTFP08582 738 aa12.59□□□□□ -0.39
CHD3-205ENST00000449744 SELLP14151 372 aa12.59□□□□□ -0.39
CHD3-205ENST00000449744 NDUFB7P17568 137 aa12.59□□□□□ -0.39
CHD3-205ENST00000449744 HTR1FP30939 366 aa12.59□□□□□ -0.39
CHD3-205ENST00000449744 POLR2IP36954 125 aaKnown RBP12.59□□□□□ -0.39
CHD3-205ENST00000449744 DGUOKQ16854 277 aa12.59□□□□□ -0.39
CHD3-205ENST00000449744 CLVS2Q5SYC1 327 aa12.59□□□□□ -0.39
CHD3-205ENST00000449744 TMEM86BQ8N661 226 aa12.59□□□□□ -0.39
CHD3-205ENST00000449744 KIR3DL3Q8N743 410 aa12.59□□□□□ -0.39
CHD3-205ENST00000449744 OR8J1Q8NGP2 316 aa12.59□□□□□ -0.39
CHD3-205ENST00000449744 TBC1D15Q8TC07 691 aa12.59□□□□□ -0.39
CHD3-205ENST00000449744 AQP3Q92482 292 aa12.59□□□□□ -0.39
CHD3-205ENST00000449744 RBM4BQ9BQ04 359 aaKnown RBP12.59□□□□□ -0.39
CHD3-205ENST00000449744 OSBPL10Q9BXB5 764 aa12.59□□□□□ -0.39
CHD3-205ENST00000449744 GABARAPL3Q9BY60 117 aa12.59□□□□□ -0.39
CHD3-205ENST00000449744 UNKLQ9H9P5 680 aaKnown RBP12.59□□□□□ -0.39
CHD3-205ENST00000449744 MRM2Q9UI43 246 aaKnown RBP12.59□□□□□ -0.39
CHD3-205ENST00000449744 A0A1W2PQ09 198 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 POM121CA8CG34 1229 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 DLGAP1O14490 977 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 TFF1P04155 84 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 ACAA1P09110 424 aaPredicted RBP12.58□□□□□ -0.4
CHD3-205ENST00000449744 OR2T7P0C7T2 308 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 CDC42P60953 191 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 GUCA2AQ02747 115 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 BLMHQ13867 455 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 FIP1L1Q6UN15 594 aaKnown RBP12.58□□□□□ -0.4
CHD3-205ENST00000449744 ZNF573Q86YE8 665 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 TMEM185AQ8NFB2 350 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 OR10H4Q8NGA5 316 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 OR2T27Q8NH04 317 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 SSMEM1Q8WWF3 244 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 RFKQ969G6 155 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 SIRT7Q9NRC8 400 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 GPR173Q9NS66 373 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 RASL12Q9NYN1 266 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.58□□□□□ -0.4
CHD3-205ENST00000449744 CAB39Q9Y376 341 aaPredicted RBP12.58□□□□□ -0.4
CHD3-205ENST00000449744 FAM96BQ9Y3D0 163 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 ORC6Q9Y5N6 252 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 POMT1Q9Y6A1 747 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 V9GYS6 101 aa12.58□□□□□ -0.4
CHD3-205ENST00000449744 ANK2Q01484 3957 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 A0A0U1RQK1 487 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 A0A1W2PQL4 384 aaPredicted RBP12.57□□□□□ -0.4
CHD3-205ENST00000449744 FAM181BA6NEQ2 426 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 METTL15A6NJ78 407 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 SPRY1O43609 319 aaPredicted RBP12.57□□□□□ -0.4
CHD3-205ENST00000449744 APOL3O95236 402 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 PSG2P11465 335 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 OMGP23515 440 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 EEF1B2P24534 225 aaKnown RBP12.57□□□□□ -0.4
CHD3-205ENST00000449744 HAAOP46952 286 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 CAPZA1P52907 286 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 CAV3P56539 151 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 TMED1Q13445 227 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 ASRGL1Q7L266 308 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 SSX6Q7RTT6 188 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 POC1AQ8NBT0 407 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 OR14K1Q8NGZ2 314 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 C8orf46Q8TAG6 207 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 PYDC1Q8WXC3 89 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 TAF15Q92804 592 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHD3-205ENST00000449744 ADI1Q9BV57 179 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 CHIAQ9BZP6 476 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 PLEKHA1Q9HB21 404 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 IMPAD1Q9NX62 359 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 SLC22A13Q9Y226 551 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 POLDIP2Q9Y2S7 368 aa12.57□□□□□ -0.4
CHD3-205ENST00000449744 IGKV1D-17A0A075B6S4 117 aa12.56□□□□□ -0.4
CHD3-205ENST00000449744 A0A1B0GTI1 187 aa12.56□□□□□ -0.4
CHD3-205ENST00000449744 A6NIN4 97 aa12.56□□□□□ -0.4
CHD3-205ENST00000449744 DHRS7CA6NNS2 312 aa12.56□□□□□ -0.4
CHD3-205ENST00000449744 J3QT63 122 aa12.56□□□□□ -0.4
CHD3-205ENST00000449744 MDKP21741 143 aaPredicted RBP12.56□□□□□ -0.4
CHD3-205ENST00000449744 ODF4Q2M2E3 257 aa12.56□□□□□ -0.4
CHD3-205ENST00000449744 SMIM21Q3B7S5 101 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms