RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 ARHGAP5-AS1Q96IT6 56 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 SCNM1Q9BWG6 230 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 CACNA1HO95180 2353 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 PRR19A6NJB7 356 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 DCTN6O00399 190 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 ZIC2O95409 532 aaPredicted RBP6.52□□□□□ -1.37
SYNE1-213ENST00000448038 CLDN1O95832 211 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 PGA4P0DJD7 388 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 PGA3P0DJD8 388 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 ELP2Q6IA86 826 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 SLC36A1Q7Z2H8 476 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 OR2AK2Q8NG84 335 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 OR4C16Q8NGL9 310 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 CCL17Q92583 94 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 NPAP1Q9NZP6 1156 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 KLHDC2Q9Y2U9 406 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 ZNF354AO60765 605 aaPredicted RBP6.52□□□□□ -1.37
SYNE1-213ENST00000448038 MMP16P51512 607 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 SSBP1Q04837 148 aaKnown RBP6.52□□□□□ -1.37
SYNE1-213ENST00000448038 SHEQ5VZ18 495 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 ZNF767PQ75MW2 155 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 NFAM1Q8NET5 270 aaPredicted RBP6.52□□□□□ -1.37
SYNE1-213ENST00000448038 OR10AC1Q8NH08 325 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 LRRC29Q8WV35 223 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 KCNK17Q96T54 332 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 PTDSS2Q9BVG9 487 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 NMNAT2Q9BZQ4 307 aa6.52□□□□□ -1.37
SYNE1-213ENST00000448038 TMEM30CPA0ZSE6 113 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 NPIPB9F8W1W9 429 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 CCSO14618 274 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 NDUFB3O43676 98 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 MED6O75586 246 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 NXPH3O95157 252 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 MT-CO2P00403 227 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 LALBAP00709 142 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 IFNA10P01566 189 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 RAB6AP20340 208 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 ZNF92Q03936 586 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 BAMBIQ13145 260 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 LRRC10Q5BKY1 277 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 OR4S1Q8NGB4 309 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 MARCH1Q8TCQ1 289 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 GALMQ96C23 342 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 LRFN3Q9BTN0 628 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 CXXC4Q9H2H0 198 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 TRGV10A0A0A0MS01 117 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 A0A1W2PNV4 684 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 TUBAL3A6NHL2 446 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 ZNF705EA8MWA4 302 aaPredicted RBP6.51□□□□□ -1.37
SYNE1-213ENST00000448038 RAB27BO00194 218 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 TSPAN15O95858 294 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 IGF2P01344 180 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 HIST1H1DP16402 221 aaKnown RBP6.51□□□□□ -1.37
SYNE1-213ENST00000448038 TGM1P22735 817 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 HFEQ30201 348 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 CD276Q5ZPR3 534 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 SDSLQ96GA7 329 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 PBDC1Q9BVG4 233 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 ZNF436Q9C0F3 470 aaPredicted RBP6.51□□□□□ -1.37
SYNE1-213ENST00000448038 RBM38Q9H0Z9 239 aaKnown RBP6.51□□□□□ -1.37
SYNE1-213ENST00000448038 FLVCR2Q9UPI3 526 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 FBXO7Q9Y3I1 522 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 RFPL3SP0C7P2 107 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 SCAND1P57086 179 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 OXA1LQ15070 435 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 POU4F3Q15319 338 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 OR2B11Q5JQS5 317 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 H2BFWTQ7Z2G1 175 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 TMEM200AQ86VY9 491 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 ASB5Q8WWX0 329 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 S1PR3Q99500 378 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 SRXN1Q9BYN0 137 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 OPN3Q9H1Y3 402 aaPredicted RBP6.51□□□□□ -1.37
SYNE1-213ENST00000448038 SLA2Q9H6Q3 261 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 TMEM165Q9HC07 324 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 CTAG2O75638 210 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 ID4P47928 161 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 GABRA4P48169 554 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 EGR4Q05215 589 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 PLA2G7Q13093 441 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 OR52W1Q6IF63 320 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 TMEM229BQ8NBD8 167 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 ST8SIA4Q92187 359 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 WNT2BQ93097 391 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 ARL11Q969Q4 196 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 FAAP24Q9BTP7 215 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 HIPK2Q9H2X6 1198 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 HEYLQ9NQ87 328 aaPredicted RBP6.51□□□□□ -1.37
SYNE1-213ENST00000448038 ASF1BQ9NVP2 202 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 A0A0D9SG52 128 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 AKR7A2O43488 359 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 CRYBA2P53672 197 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 RFPL4BQ6ZWI9 263 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 C6orf201Q7Z4U5 140 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 OR10AD1Q8NGE0 317 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 OR51A4Q8NGJ6 313 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 SLC25A40Q8TBP6 338 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 EDARADDQ8WWZ3 215 aa6.51□□□□□ -1.37
SYNE1-213ENST00000448038 ZCCHC14Q8WYQ9 949 aaKnown RBP6.51□□□□□ -1.37
SYNE1-213ENST00000448038 C10orf35Q96D05 121 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms