RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 HCKP08631 526 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 MPZP25189 248 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 MTCP1P56278 107 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 ZP1P60852 638 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 ZNF154Q13106 437 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 PCGF3Q3KNV8 242 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 DYNC2LI1Q8TCX1 351 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 FOXRED1Q96CU9 486 aaPredicted RBP12.8□□□□□ -0.36
CCNE1-203ENST00000444983 OR2V2Q96R30 315 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 UQCC2Q9BRT2 126 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 TPK1Q9H3S4 243 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 C14orf119Q9NWQ9 140 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.8□□□□□ -0.36
CCNE1-203ENST00000444983 IFITM5A6NNB3 132 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 NOTOA8MTQ0 251 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 MAGEB3O15480 346 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 NOL3O60936 208 aaKnown RBP12.8□□□□□ -0.36
CCNE1-203ENST00000444983 NCR1O76036 304 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 ATP1B3P54709 279 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 CAV3P56539 151 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 RIN1Q13671 783 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 MPPED2Q15777 294 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 GLT8D1Q68CQ7 371 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 ZNF787Q6DD87 383 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 SLC25A28Q96A46 364 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 MEGF10Q96KG7 1140 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 NKX3-1Q99801 234 aaPredicted RBP12.8□□□□□ -0.36
CCNE1-203ENST00000444983 BARHL1Q9BZE3 327 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 CNTD2Q9H8S5 307 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 NEK6Q9HC98 313 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 DYNLRB1Q9NP97 96 aa12.8□□□□□ -0.36
CCNE1-203ENST00000444983 SMIM30A4D0T7 59 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 LRP5LA4QPB2 252 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 SLC17A2O00624 439 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 BMP4P12644 408 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 HAAOP46952 286 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 KRTAP10-9P60411 292 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 CCL8P80075 99 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 TNFAIP6P98066 277 aaPredicted RBP12.79□□□□□ -0.36
CCNE1-203ENST00000444983 MZT1Q08AG7 82 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 SFXN4Q6P4A7 337 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 ASCL4Q6XD76 172 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 ANGPTL5Q86XS5 388 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 ZNF573Q86YE8 665 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 SCCPDHQ8NBX0 429 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 OR4D6Q8NGJ1 314 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 ITLN1Q8WWA0 313 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 C1orf147Q96MC9 270 aaPredicted RBP12.79□□□□□ -0.36
CCNE1-203ENST00000444983 LIME1Q9H400 295 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 PMF1-BGLAPU3KQ54 211 aa12.79□□□□□ -0.36
CCNE1-203ENST00000444983 AIPO00170 330 aa12.78□□□□□ -0.36
CCNE1-203ENST00000444983 OCMP0CE72 109 aaPredicted RBP12.78□□□□□ -0.36
CCNE1-203ENST00000444983 SRP9P49458 86 aaKnown RBP12.78□□□□□ -0.36
CCNE1-203ENST00000444983 PDZK1IP1Q13113 114 aa12.78□□□□□ -0.36
CCNE1-203ENST00000444983 C1QL2Q7Z5L3 287 aa12.78□□□□□ -0.36
CCNE1-203ENST00000444983 AQP3Q92482 292 aa12.78□□□□□ -0.36
CCNE1-203ENST00000444983 CPNE2Q96FN4 548 aaPredicted RBP12.78□□□□□ -0.36
CCNE1-203ENST00000444983 SORCS2Q96PQ0 1159 aa12.78□□□□□ -0.36
CCNE1-203ENST00000444983 CACNG6Q9BXT2 260 aa12.78□□□□□ -0.36
CCNE1-203ENST00000444983 PKIBQ9C010 78 aa12.78□□□□□ -0.36
CCNE1-203ENST00000444983 GCM1Q9NP62 436 aa12.78□□□□□ -0.36
CCNE1-203ENST00000444983 CDIPTO14735 213 aa12.77□□□□□ -0.36
CCNE1-203ENST00000444983 TMEM127O75204 238 aa12.77□□□□□ -0.36
CCNE1-203ENST00000444983 ACAA1P09110 424 aaPredicted RBP12.77□□□□□ -0.36
CCNE1-203ENST00000444983 ZNF182P17025 639 aaPredicted RBP12.77□□□□□ -0.36
CCNE1-203ENST00000444983 TNFSF4P23510 183 aa12.77□□□□□ -0.36
CCNE1-203ENST00000444983 CFHR2P36980 270 aa12.77□□□□□ -0.36
CCNE1-203ENST00000444983 PMELP40967 661 aa12.77□□□□□ -0.36
CCNE1-203ENST00000444983 PTGFRP43088 359 aa12.77□□□□□ -0.36
CCNE1-203ENST00000444983 OR3A4PP47883 348 aa12.77□□□□□ -0.36
CCNE1-203ENST00000444983 IL24Q13007 206 aa12.77□□□□□ -0.36
CCNE1-203ENST00000444983 TESK1Q15569 626 aa12.77□□□□□ -0.36
CCNE1-203ENST00000444983 PRAMEF6Q5VXH4 476 aa12.77□□□□□ -0.36
CCNE1-203ENST00000444983 HAGHLQ6PII5 290 aaPredicted RBP12.77□□□□□ -0.36
CCNE1-203ENST00000444983 CROCCP3Q8IVE0 287 aa12.77□□□□□ -0.36
CCNE1-203ENST00000444983 JAGN1Q8N5M9 183 aa12.77□□□□□ -0.36
CCNE1-203ENST00000444983 OR6M1Q8NGM8 313 aa12.77□□□□□ -0.36
CCNE1-203ENST00000444983 ERGIC1Q969X5 290 aa12.77□□□□□ -0.36
CCNE1-203ENST00000444983 RFT1Q96AA3 541 aa12.77□□□□□ -0.36
CCNE1-203ENST00000444983 TANC2Q9HCD6 1990 aa12.77□□□□□ -0.36
CCNE1-203ENST00000444983 POLQO75417 2590 aa12.77□□□□□ -0.37
CCNE1-203ENST00000444983 CSMD2Q7Z408 3487 aa12.77□□□□□ -0.37
CCNE1-203ENST00000444983 USF3Q68DE3 2245 aa12.77□□□□□ -0.37
CCNE1-203ENST00000444983 IGKV1-12A0A0C4DH73 117 aa12.77□□□□□ -0.37
CCNE1-203ENST00000444983 IGHV3-64DA0A0J9YX35 117 aa12.77□□□□□ -0.37
CCNE1-203ENST00000444983 RHBDL1O75783 438 aa12.77□□□□□ -0.37
CCNE1-203ENST00000444983 IGKV1D-12P01611 117 aa12.77□□□□□ -0.37
CCNE1-203ENST00000444983 HPXP02790 462 aa12.77□□□□□ -0.37
CCNE1-203ENST00000444983 GRPP07492 148 aa12.77□□□□□ -0.37
CCNE1-203ENST00000444983 TNFRSF1AP19438 455 aa12.77□□□□□ -0.37
CCNE1-203ENST00000444983 HTR2CP28335 458 aa12.77□□□□□ -0.37
CCNE1-203ENST00000444983 HNRNPA0Q13151 305 aaKnown RBP12.77□□□□□ -0.37
CCNE1-203ENST00000444983 WDR82Q6UXN9 313 aa12.77□□□□□ -0.37
CCNE1-203ENST00000444983 SAXO1Q8IYX7 474 aa12.77□□□□□ -0.37
CCNE1-203ENST00000444983 ZSCAN4Q8NAM6 433 aaPredicted RBP12.77□□□□□ -0.37
CCNE1-203ENST00000444983 PXT1Q8NFP0 134 aa12.77□□□□□ -0.37
CCNE1-203ENST00000444983 OR5D18Q8NGL1 313 aa12.77□□□□□ -0.37
CCNE1-203ENST00000444983 Q8TCH9 128 aa12.77□□□□□ -0.37
CCNE1-203ENST00000444983 VRK1Q99986 396 aaPredicted RBP12.77□□□□□ -0.37
CCNE1-203ENST00000444983 SLIRPQ9GZT3 109 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms