RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 SPACA3Q8IXA5 215 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 MSRB3Q8IXL7 192 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 MTURNQ8N3F0 131 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 C2orf73Q8N5S3 287 aaPredicted RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 NECAP1Q8NC96 275 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 OR4D9Q8NGE8 314 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 OR52M1Q8NGK5 317 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 OR2Y1Q8NGV0 311 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 STT3BQ8TCJ2 826 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 DVL3Q92997 716 aaPredicted RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 WBP2Q969T9 261 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 TMEM106AQ96A25 262 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 MUCL1Q96DR8 90 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 KLHDC7BQ96G42 594 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SFRP2Q96HF1 295 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 CDKN2AIPNLQ96HQ2 116 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SAMD8Q96LT4 415 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 FOXN4Q96NZ1 517 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 ARHGDIGQ99819 225 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 RAB11FIP5Q9BXF6 653 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 TTTY10Q9BZA0 68 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 C12orf49Q9H741 205 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 ADGRL4Q9HBW9 690 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 IL26Q9NPH9 171 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SLC52A3Q9NQ40 469 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 RBM22Q9NW64 420 aaKnown RBP eCLIP2.48□□□□□ -2.01
LIG4-203ENST00000442234 MARCH2Q9P0N8 246 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 UQCR10Q9UDW1 63 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 FBXO4Q9UKT5 387 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 MRPS33Q9Y291 106 aaKnown RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 POLR3KQ9Y2Y1 108 aaPredicted RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 SNX10Q9Y5X0 201 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 COX11Q9Y6N1 276 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 RELNP78509 3460 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 A0A1W2PRS3 328 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 OR51F1A6NGY5 319 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 ZNF891A8MT65 544 aaPredicted RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 CORTO00230 105 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 GPR39O43194 453 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 ZNF207O43670 478 aaKnown RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 EDIL3O43854 480 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 TMPRSS11DO60235 418 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 RAMP3O60896 148 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 STK16O75716 305 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SLCO2B1O94956 709 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 CER1O95813 267 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 CYB5AP00167 134 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 CST3P01034 146 aaPredicted RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 SLC25A4P12235 298 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 ATF1P18846 271 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 EDNRAP25101 427 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 UQCRFS1P47985 274 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SLC6A8P48029 635 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 CSNK1A1P48729 337 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 PNLIPRP1P54315 467 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 CLDN18P56856 261 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 IL2P60568 153 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 KRTDAPP60985 99 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 DCAF7P61962 342 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 CSNK2A1P68400 391 aaPredicted RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 ZXDBP98169 803 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 NAAAQ02083 359 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 TMEM267Q0VDI3 215 aaPredicted RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 DOC2BQ14184 412 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 EIF2B1Q14232 305 aaKnown RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 ELOBQ15370 118 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SLC10A6Q3KNW5 377 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 TMEM196Q5HYL7 178 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 COX20Q5RI15 118 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 ZNF684Q5T5D7 378 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 AADACL3Q5VUY0 350 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 REEP3Q6NUK4 255 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 OVCH1Q7RTY7 1134 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 LINC01551Q86U37 167 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 DND1Q8IYX4 353 aaKnown RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 LINC00471Q8N535 108 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 BMPERQ8N8U9 685 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 LFNGQ8NES3 379 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 CSNK2A3Q8NEV1 391 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 OR5W2Q8NH69 310 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 RNASEH2CQ8TDP1 164 aaKnown RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 TMEM239Q8WW34 195 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 GHSRQ92847 366 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 STARD4Q96DR4 205 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 POM121L2Q96KW2 1035 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SLC46A1Q96NT5 459 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 ZNF607Q96SK3 696 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SPXQ9BT56 116 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 EBPLQ9BY08 206 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 PARP11Q9NR21 331 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 OR5AC2Q9NZP5 309 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 FOXD3Q9UJU5 478 aaPredicted RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 HS3ST3B1Q9Y662 390 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 KIR2DL5BA0A0G2JN68 375 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 KIR2DL5BA0A0G2JPC4 375 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 CLEC18AA5D8T8 446 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 A8MVM7 634 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 C9JQL5 133 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 FTCDNL1E5RQL4 147 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 C5orf67F2Z3F1 127 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms