RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 CLCC1Q96S66 551 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 SERPINI1Q99574 410 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 KLF6Q99612 283 aaPredicted RBP3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 RAB34Q9BZG1 259 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 FGF20Q9NP95 211 aaPredicted RBP3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 CLN6Q9NWW5 311 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 SLC25A37Q9NYZ2 338 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 DHCR7Q9UBM7 475 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 B4GALT7Q9UBV7 327 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 SS18L2Q9UHA2 77 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 FBXO5Q9UKT4 447 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 SLC17A4Q9Y2C5 497 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 AKAP12Q02952 1782 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 NRKQ7Z2Y5 1582 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 USP6P35125 1406 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 USP42Q9H9J4 1324 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR6C6A6NF89 314 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 EVPLLA8MZ36 301 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 HACD1B0YJ81 288 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 TRDCB7Z8K6 153 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 FAM72CH0Y354 149 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 GPR31O00270 319 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 NTN3O00634 580 aaPredicted RBP3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 PLPP1O14494 284 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 PLPP3O14495 311 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 CYB5BO43169 146 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 S1PR2O95136 353 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 ARG1P05089 322 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR10J4P0C629 311 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 C1GALT1C1LP0DN25 315 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 GABRA1P14867 456 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 S100GP29377 79 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 PRDX3P30048 256 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 XCR1P46094 333 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR1D4P47884 311 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR2B8PP59922 312 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 RAB2AP61019 212 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 MAXP61244 160 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 STXBP1P61764 594 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 RPS14P62263 151 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 SPA17Q15506 151 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR8G1Q15617 311 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 ATP6V1FQ16864 119 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 MS4A18Q3C1V0 323 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 OGFRL1Q5TC84 451 aaPredicted RBP3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 FAM72AQ5TYM5 149 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 FAM72DQ6L9T8 149 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 SLC36A1Q7Z2H8 476 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 FAM72BQ86X60 149 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 APOBEC3FQ8IUX4 373 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 SLC34A3Q8N130 599 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR1P1Q8NH06 330 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 SFXN5Q8TD22 340 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 NAT14Q8WUY8 206 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 IL1F10Q8WWZ1 152 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 GHSRQ92847 366 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 MED8Q96G25 268 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF599Q96NL3 588 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 F2RL3Q96RI0 385 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 GPR22Q99680 433 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 OSBPL11Q9BXB4 747 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 OCR1Q9BZK8 76 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 ARL6Q9H0F7 186 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 PPDPFQ9H3Y8 114 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 DHX35Q9H5Z1 703 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 RDH14Q9HBH5 336 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF107Q9UII5 783 aaPredicted RBP3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 UBQLN1Q9UMX0 589 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 SLC35A3Q9Y2D2 325 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 MYOM1P52179 1685 aa3.28□□□□□ -1.89
CDC42BPA-207ENST00000441725 MAST1Q9Y2H9 1570 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 A2MP01023 1474 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 CAMSAP2Q08AD1 1489 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 VPS8Q8N3P4 1428 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 GJE1A6NN92 205 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 FOXI3A8MTJ6 420 aaPredicted RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 ZNF878C9JN71 531 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 CHST10O43529 356 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 FAM107AO95990 144 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 MT-CO2P00403 227 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 MT-ND4P03905 459 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 TYMSP04818 313 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 C8orf88P0DMB2 117 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 BCL3P20749 454 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 IFNGR2P38484 337 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 LEPP41159 167 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 KIR2DS4P43632 304 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 PSMD8P48556 350 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 GSK3BP49841 420 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 PRKCDQ05655 676 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 CD300CQ08708 224 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 ZNF616Q08AN1 781 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 ELAVL2Q12926 359 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 SURF2Q15527 256 aaPredicted RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 C17orf58Q2M2W7 97 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 TRMT5Q32P41 509 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 SPIN4Q56A73 249 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 N4BP2L1Q5TBK1 243 aaPredicted RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 UBE2UQ5VVX9 321 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms