RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 BIDP55957 195 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 PAFAH1B2P68402 229 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 C4orf26Q17RF5 130 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 NKPD1Q17RQ9 610 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 SPANXN3Q5MJ09 141 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 COL5A1-AS1Q5SY13 56 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 GRHL2Q6ISB3 625 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 DUX4L9Q6RFH8 374 aaPredicted RBP9.17□□□□□ -0.94
SYNE2-206ENST00000441438 FAM19A1Q7Z5A9 133 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 SULT4A1Q9BR01 284 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 NMRAL1Q9HBL8 299 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 MARCH2Q9P0N8 246 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 DUX4Q9UBX2 424 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 TESQ9UGI8 421 aaKnown RBP9.17□□□□□ -0.94
SYNE2-206ENST00000441438 E7ENX8 843 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 NPIPB9F8W1W9 429 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 DIRAS1O95057 198 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 TCTAP57738 103 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 LILRA4P59901 499 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 ST3GAL4Q11206 333 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 DHRS11Q6UWP2 260 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 CMTM1Q8IZ96 169 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 PLPPR1Q8TBJ4 325 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 MOB3AQ96BX8 217 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 HIST1H2AHQ96KK5 128 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 HIST1H2AJQ99878 128 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 LPAR5Q9H1C0 372 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 BPIFA1Q9NP55 256 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 FAM96BQ9Y3D0 163 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 ANKRD12Q6UB98 2062 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 SHROOM3Q8TF72 1996 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 CDH23Q9H251 3354 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 WDR27A2RRH5 827 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 DLL1O00548 723 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 SULT1A1P50225 295 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 SULT1A2P50226 295 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 QPRTQ15274 297 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 ODF4Q2M2E3 257 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 WDR74Q6RFH5 385 aaPredicted RBP9.16□□□□□ -0.94
SYNE2-206ENST00000441438 PAMR1Q6UXH9 720 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 SLC39A11Q8N1S5 342 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 TMEM151AQ8N4L1 468 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 PNPLA1Q8N8W4 532 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 XAGE5Q8WWM1 108 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 TEX37Q96LM6 180 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 VN1R1Q9GZP7 353 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 SLC25A51Q9H1U9 297 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 NOX4Q9NPH5 578 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 C1orf123Q9NWV4 160 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 OR5H1A6NKK0 313 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 G3V4G9 280 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 PHF1O43189 567 aaPredicted RBP9.16□□□□□ -0.94
SYNE2-206ENST00000441438 S1PR4O95977 384 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 FGF2P09038 288 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 CBR4Q8N4T8 237 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 OR4N2Q8NGD1 307 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 OR10G4Q8NGN3 311 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 GRAMD2BQ96HH9 432 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 GNRHR2Q96P88 292 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 C16orf70Q9BSU1 422 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 OR51I1Q9H343 314 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 CXorf36Q9H7Y0 433 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 SLC7A10Q9NS82 523 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 IL36GQ9NZH8 169 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 OPTCQ9UBM4 332 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 SNX10Q9Y5X0 201 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 C5orf42Q9H799 3197 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 MICAL3Q7RTP6 2002 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 TRAV30A0A087WSZ9 112 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 A0A0A6YYD5 115 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 PLPP1O14494 284 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 UBFD1O14562 309 aaKnown RBP9.16□□□□□ -0.94
SYNE2-206ENST00000441438 EML2O95834 649 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 SELEP16581 610 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 FCARP24071 287 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 ZBTB25P24278 435 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 IL12AP29459 219 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 OPRL1P41146 370 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 ATP4BP51164 291 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 GEMP55040 296 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 BCL2L1Q07817 233 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 ADIGQ0VDE8 80 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 EIF2B1Q14232 305 aaKnown RBP9.16□□□□□ -0.94
SYNE2-206ENST00000441438 TMEM97Q5BJF2 176 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 MBOAT2Q6ZWT7 520 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 ZNF605Q86T29 641 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 NFAM1Q8NET5 270 aaPredicted RBP9.16□□□□□ -0.94
SYNE2-206ENST00000441438 TAPBPLQ9BX59 468 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 SLC29A3Q9BZD2 475 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 THYN1Q9P016 225 aa9.16□□□□□ -0.94
SYNE2-206ENST00000441438 MAP1LC3B2A6NCE7 125 aa9.15□□□□□ -0.94
SYNE2-206ENST00000441438 STC1P52823 247 aa9.15□□□□□ -0.94
SYNE2-206ENST00000441438 TAS2R31P59538 309 aa9.15□□□□□ -0.94
SYNE2-206ENST00000441438 EXOSC7Q15024 291 aaKnown RBP9.15□□□□□ -0.94
SYNE2-206ENST00000441438 HIST2H2ACQ16777 129 aaPredicted RBP9.15□□□□□ -0.94
SYNE2-206ENST00000441438 ATP6AP1LQ52LC2 224 aa9.15□□□□□ -0.94
SYNE2-206ENST00000441438 PAQR6Q6TCH4 344 aa9.15□□□□□ -0.94
SYNE2-206ENST00000441438 C12orf54Q6X4T0 127 aa9.15□□□□□ -0.94
SYNE2-206ENST00000441438 CMC1Q7Z7K0 106 aa9.15□□□□□ -0.94
SYNE2-206ENST00000441438 ABHD12Q8N2K0 398 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms