RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TUBD1Q9UJT1 453 aa10.5□□□□□ -0.73
LTBR-203ENST00000441074 MUC6Q6W4X9 2439 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 ELOA3CA0A087WX78 387 aaPredicted RBP10.49□□□□□ -0.73
LTBR-203ENST00000441074 TMEM269A0A1B0GVZ9 245 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 CXorf65A6NEN9 183 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 GIMD1P0DJR0 217 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 OR13C7P0DN81 318 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 HIST1H1DP16402 221 aaKnown RBP10.49□□□□□ -0.73
LTBR-203ENST00000441074 FOXL2P58012 376 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 HSD11B2P80365 405 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 RSU1Q15404 277 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 SHBQ15464 509 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 SSX2Q16385 188 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 SOHLH1Q5JUK2 328 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 ZNF529Q6P280 563 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 COX15Q7KZN9 410 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 LRRC18Q8N456 261 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 LFNGQ8NES3 379 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 SNIP1Q8TAD8 396 aaKnown RBP10.49□□□□□ -0.73
LTBR-203ENST00000441074 EMG1Q92979 244 aaKnown RBP10.49□□□□□ -0.73
LTBR-203ENST00000441074 GINS3Q9BRX5 216 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 SUSD2Q9UGT4 822 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 SRPK3Q9UPE1 567 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 FBXO7Q9Y3I1 522 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 TRAV36DV7A0A075B6V5 113 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 A0A0A6YYD4 124 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 BORCS7-ASMTA0A0B4J1R7 106 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 MASP2O00187 686 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 UTS2O95399 124 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 MT-ATP6P00846 226 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 CLPSP04118 112 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 GNALP38405 381 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 SPCS3P61009 180 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 ZNF117Q03924 483 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 PLAC9Q5JTB6 97 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 C1QL3Q5VWW1 255 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 ST7LQ8TDW4 575 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 ERGIC1Q969X5 290 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 NTNG2Q96CW9 530 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 C2orf88Q9BSF0 95 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 TXNIPQ9H3M7 391 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 PTGES2Q9H7Z7 377 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 B3GALT5Q9Y2C3 310 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 PUS1Q9Y606 427 aaKnown RBP eCLIP10.49□□□□□ -0.73
LTBR-203ENST00000441074 R4GN57 208 aa10.49□□□□□ -0.73
LTBR-203ENST00000441074 PCDH15Q96QU1 1955 aa10.48□□□□□ -0.73
LTBR-203ENST00000441074 A0A087X0M5 115 aa10.48□□□□□ -0.73
LTBR-203ENST00000441074 A0A1B0GX30 115 aa10.48□□□□□ -0.73
LTBR-203ENST00000441074 TSTD3H0UI37 97 aa10.48□□□□□ -0.73
LTBR-203ENST00000441074 AMY2BP19961 511 aa10.48□□□□□ -0.73
LTBR-203ENST00000441074 GLO1Q04760 184 aa10.48□□□□□ -0.73
LTBR-203ENST00000441074 GAMTQ14353 236 aa10.48□□□□□ -0.73
LTBR-203ENST00000441074 SURF2Q15527 256 aaPredicted RBP10.48□□□□□ -0.73
LTBR-203ENST00000441074 ZNF674Q2M3X9 581 aa10.48□□□□□ -0.73
LTBR-203ENST00000441074 C1orf140Q5VVS0 124 aa10.48□□□□□ -0.73
LTBR-203ENST00000441074 SPNS3Q6ZMD2 512 aa10.48□□□□□ -0.73
LTBR-203ENST00000441074 HIST3H2BBQ8N257 126 aa10.48□□□□□ -0.73
LTBR-203ENST00000441074 SUMF2Q8NBJ7 301 aa10.48□□□□□ -0.73
LTBR-203ENST00000441074 SSX3Q99909 188 aa10.48□□□□□ -0.73
LTBR-203ENST00000441074 DUSP15Q9H1R2 295 aaPredicted RBP10.48□□□□□ -0.73
LTBR-203ENST00000441074 SMOC1Q9H4F8 434 aa10.48□□□□□ -0.73
LTBR-203ENST00000441074 MMP24Q9Y5R2 645 aa10.48□□□□□ -0.73
LTBR-203ENST00000441074 A0A087WWC5 75 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 LOC101059948A0A1B0GTJ6 334 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 FRG2CA6NGY1 282 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 ZNF587BE7ETH6 402 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 PPP1R2P9O14990 202 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 SYT7O43581 403 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 HIST1H2BKO60814 126 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 HIST1H2BJP06899 126 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 PAX1P15863 534 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 HIST1H2BOP23527 126 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 CRABP1P29762 137 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 HIST1H2BBP33778 126 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 RBMXP38159 391 aaKnown RBP10.47□□□□□ -0.73
LTBR-203ENST00000441074 OR3A2P47893 321 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 FHITP49789 147 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 ZNF84P51523 738 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 HIST1H2BDP58876 126 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 HIST1H2BCP62807 126 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 SGCBQ16585 318 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 HIST2H2BEQ16778 126 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.47□□□□□ -0.73
LTBR-203ENST00000441074 DEGS2Q6QHC5 323 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 TTLL10Q6ZVT0 673 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 ZNF101Q8IZC7 436 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 FNDC9Q8TBE3 224 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 HIST1H2BHQ93079 126 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 ADAT3Q96EY9 351 aaPredicted RBP10.47□□□□□ -0.73
LTBR-203ENST00000441074 SLC46A1Q96NT5 459 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 HIST1H2BNQ99877 126 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 HIST1H2BMQ99879 126 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 OR11A1Q9GZK7 315 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 ZDHHC8Q9ULC8 765 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 COA3Q9Y2R0 106 aaPredicted RBP10.47□□□□□ -0.73
LTBR-203ENST00000441074 BTBD17A6NE02 478 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 ZNF724A8MTY0 619 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 A8MVM7 634 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 SOCS1O15524 211 aa10.47□□□□□ -0.73
LTBR-203ENST00000441074 RAD51DO75771 328 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms