RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 PNLIPRP3Q17RR3 467 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 HLA-BQ31612 363 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 Q7L0L9 218 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 PEG10Q86TG7 708 aaKnown RBP11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 YRDCQ86U90 279 aaKnown RBP11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 SLC25A43Q8WUT9 341 aaPredicted RBP11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 NABP1Q96AH0 204 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 SGK3Q96BR1 496 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 LIME1Q9H400 295 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 ZNF629Q9UEG4 869 aaPredicted RBP11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 TNRC18O15417 2968 aaPredicted RBP11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 TRBV6-7A0A0A0MS04 114 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 A0A0J9YW62 118 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 MSTNO14793 375 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 ZIC3O60481 467 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 CFIP05156 583 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 MRPL14Q6P1L8 145 aaKnown RBP11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 HAGHLQ6PII5 290 aaPredicted RBP11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 OR9K2Q8NGE7 335 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 AKR7LQ8NHP1 331 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 ARL11Q969Q4 196 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 C2orf50Q96LR7 162 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 ALKBH3Q96Q83 286 aaPredicted RBP11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 NUDT16L1Q9BRJ7 211 aaKnown RBP11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 HPF1Q9NWY4 346 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 DKKL1Q9UK85 242 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 LSM5Q9Y4Y9 91 aaKnown RBP11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 PRF1P14222 555 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 NPBWR1P48145 328 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 HGFACQ04756 655 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 ACTBL2Q562R1 376 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 ZNF774Q6NX45 483 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 ADPRHL1Q8NDY3 354 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 STOML3Q8TAV4 291 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 SRXN1Q9BYN0 137 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 CHRDQ9H2X0 955 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 ANAPC10Q9UM13 185 aa11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 C14orf166Q9Y224 244 aaKnown RBP11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 PRRC2CQ9Y520 2896 aaKnown RBP11.84□□□□□ -0.51
HERPUD1-204ENST00000439977 UMODP07911 640 aa11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 NAT2P11245 290 aa11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 TAS2R46P59540 309 aa11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 SPEM2Q0P670 501 aa11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 SCRN3Q0VDG4 424 aa11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 RBM39Q14498 530 aaKnown RBP11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 KCNMB1Q16558 191 aa11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 MST1LQ2TV78 715 aa11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 LYSMD4Q5XG99 296 aa11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 PLXDC2Q6UX71 529 aa11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 SVBPQ8N300 66 aa11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 POC1AQ8NBT0 407 aa11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 SAP25Q8TEE9 199 aa11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 HAS2Q92819 552 aa11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 SHDQ96IW2 340 aa11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 CHST5Q9GZS9 411 aa11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 PROK2Q9HC23 129 aa11.83□□□□□ -0.51
HERPUD1-204ENST00000439977 EXPH5Q8NEV8 1989 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 FAM186AA6NE01 2351 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 ASPMQ8IZT6 3477 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 A0A0G2JMM0 328 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 A0A1W2PPB8 328 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 A0A1W2PRS3 328 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 ZNF850A8MQ14 1090 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 KIR3DP1A8MWS1 328 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 PATE3B3GLJ2 98 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 MED6O75586 246 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 IGHV3-9P01782 118 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 CSTBP04080 98 aaKnown RBP11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 CD79AP11912 226 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 B4GALT1P15291 398 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 CPT2P23786 658 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 RBMXP38159 391 aaKnown RBP11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 STARD6P59095 220 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 LSM6P62312 80 aaKnown RBP11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 SULF2Q8IWU5 870 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 ZIC4Q8N9L1 334 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 MRPL24Q96A35 216 aaKnown RBP11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 SLC5A7Q9GZV3 580 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 TAF9BQ9HBM6 251 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 CRLF2Q9HC73 371 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 PURGQ9UJV8 347 aaKnown RBP11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 NXT1Q9UKK6 140 aaKnown RBP11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 MED19A0JLT2 244 aaPredicted RBP11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 RAB19A4D1S5 217 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 CEACAM18A8MTB9 384 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 MTRF1O75570 445 aaKnown RBP11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 IFNA2P01563 188 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 LCATP04180 440 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 LPAR6P43657 344 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 AKR1D1P51857 326 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 PIGYQ3MUY2 71 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 PABPC1L2AQ5JQF8 200 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 REEP6Q96HR9 211 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 CNTNAP3BQ96NU0 1288 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 LPAR3Q9UBY5 353 aa11.83□□□□□ -0.52
HERPUD1-204ENST00000439977 IGKV1-27A0A075B6S5 117 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 FOXI3A8MTJ6 420 aaPredicted RBP11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 MUC1P15941 1255 aaPredicted RBP11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 ZNF708P17019 499 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 ADH6P28332 368 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms