RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 IGKV1D-17A0A075B6S4 117 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 SLC22A31A6NKX4 558 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 NDUFA7O95182 113 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 IGHV4-59P01825 116 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 CRYBA1P05813 215 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 GLRA1P23415 457 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 IER3P46695 156 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 RAG2P55895 527 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 C1orf122Q6ZSJ8 110 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 MOB3CQ70IA8 216 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 THAP5Q7Z6K1 395 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 ZDHHC13Q8IUH4 622 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 SLC35F2Q8IXU6 374 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 OR4F5Q8NH21 305 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 AQP3Q92482 292 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 H1FXQ92522 213 aaKnown RBP16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 DUS3LQ96G46 650 aaKnown RBP16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 APOL4Q9BPW4 351 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 SLC25A10Q9UBX3 287 aaPredicted RBP16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 ZNF222Q9UK12 451 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 PIGLQ9Y2B2 252 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 AP4S1Q9Y587 144 aa16.68■□□□□ 0.26
NCKIPSD-206ENST00000439518 RNASEK-C17orf49H0YIS7 233 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 MAGEB4O15481 346 aaPredicted RBP16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 DHRS3O75911 302 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 PSG2P11465 335 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 FASP25445 335 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 CXCR4P61073 352 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 RPL15P61313 204 aaKnown RBP16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 AMIGO2Q86SJ2 522 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 ELMOD2Q8IZ81 293 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 ZNF671Q8TAW3 534 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 NPRL2Q8WTW4 380 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 DYRK2Q92630 601 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 TNFRSF14Q92956 283 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 IL4I1Q96RQ9 567 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 MOB1AQ9H8S9 216 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 BEX1Q9HBH7 125 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 SIRT7Q9NRC8 400 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 CLN6Q9NWW5 311 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 H2AFY2Q9P0M6 372 aaPredicted RBP16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 ENPP5Q9UJA9 477 aa16.67■□□□□ 0.26
NCKIPSD-206ENST00000439518 A0A1B0GTI1 187 aa16.66■□□□□ 0.26
NCKIPSD-206ENST00000439518 LOC110117498-PIK3R3F6TDL0 507 aa16.66■□□□□ 0.26
NCKIPSD-206ENST00000439518 GPR137BO60478 399 aa16.66■□□□□ 0.26
NCKIPSD-206ENST00000439518 MTRF1O75570 445 aaKnown RBP16.66■□□□□ 0.26
NCKIPSD-206ENST00000439518 NRASP01111 189 aa16.66■□□□□ 0.26
NCKIPSD-206ENST00000439518 RASSF2P50749 326 aa16.66■□□□□ 0.26
NCKIPSD-206ENST00000439518 PRB3Q04118 309 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-206ENST00000439518 PLCXD3Q63HM9 321 aa16.66■□□□□ 0.26
NCKIPSD-206ENST00000439518 TMEM42Q69YG0 159 aa16.66■□□□□ 0.26
NCKIPSD-206ENST00000439518 HAGHLQ6PII5 290 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-206ENST00000439518 Q6ZSR3 168 aa16.66■□□□□ 0.26
NCKIPSD-206ENST00000439518 GID4Q8IVV7 300 aa16.66■□□□□ 0.26
NCKIPSD-206ENST00000439518 RASL12Q9NYN1 266 aa16.66■□□□□ 0.26
NCKIPSD-206ENST00000439518 MRM2Q9UI43 246 aaKnown RBP16.66■□□□□ 0.26
NCKIPSD-206ENST00000439518 MAB21L2Q9Y586 359 aa16.66■□□□□ 0.26
NCKIPSD-206ENST00000439518 R4GMQ9 66 aa16.66■□□□□ 0.26
NCKIPSD-206ENST00000439518 ZNF670-ZNF695F2Z2N8 137 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 NDUFB7P17568 137 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 GABRA2P47869 451 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 DLX1P56177 255 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 ACTR3P61158 418 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 GUCA2AQ02747 115 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 EGR3Q06889 387 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 ZNF684Q5T5D7 378 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 POC1AQ8NBT0 407 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 ZNRF1Q8ND25 227 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 WFDC12Q8WWY7 111 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 LRTOMTQ8WZ04 291 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 SDSLQ96GA7 329 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 CIB1Q99828 191 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 SEMA6AQ9H2E6 1030 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 ENOPH1Q9UHY7 261 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 OR52A1Q9UKL2 312 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 FAM96BQ9Y3D0 163 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 V9GYS6 101 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 VWFP04275 2813 aa16.65■□□□□ 0.26
NCKIPSD-206ENST00000439518 M0R1W7 72 aa16.64■□□□□ 0.25
NCKIPSD-206ENST00000439518 ATP5HO75947 161 aa16.64■□□□□ 0.25
NCKIPSD-206ENST00000439518 KNG1P01042 644 aa16.64■□□□□ 0.25
NCKIPSD-206ENST00000439518 POLR2IP36954 125 aaKnown RBP16.64■□□□□ 0.25
NCKIPSD-206ENST00000439518 CLVS2Q5SYC1 327 aa16.64■□□□□ 0.25
NCKIPSD-206ENST00000439518 BCL2L15Q5TBC7 163 aa16.64■□□□□ 0.25
NCKIPSD-206ENST00000439518 C1orf146Q5VVC0 180 aa16.64■□□□□ 0.25
NCKIPSD-206ENST00000439518 OLFML2AQ68BL7 652 aa16.64■□□□□ 0.25
NCKIPSD-206ENST00000439518 ACP7Q6ZNF0 438 aa16.64■□□□□ 0.25
NCKIPSD-206ENST00000439518 PLEKHG7Q6ZR37 379 aa16.64■□□□□ 0.25
NCKIPSD-206ENST00000439518 OR14K1Q8NGZ2 314 aa16.64■□□□□ 0.25
NCKIPSD-206ENST00000439518 METTL8Q9H825 291 aaKnown RBP16.64■□□□□ 0.25
NCKIPSD-206ENST00000439518 WARS2Q9UGM6 360 aaKnown RBP16.64■□□□□ 0.25
NCKIPSD-206ENST00000439518 GTF2A1LQ9UNN4 478 aa16.64■□□□□ 0.25
NCKIPSD-206ENST00000439518 CAB39Q9Y376 341 aaPredicted RBP16.64■□□□□ 0.25
NCKIPSD-206ENST00000439518 PQLC2LA1A4F0 135 aa16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 CLPSL1A2RUU4 121 aa16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 DHRS7CA6NNS2 312 aa16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 DLGAP1O14490 977 aa16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 NPFFO15130 113 aa16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 NOS1APO75052 506 aaPredicted RBP16.63■□□□□ 0.25
NCKIPSD-206ENST00000439518 FBP1P09467 338 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms