RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 LCTP09848 1927 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 ASCC3Q8N3C0 2202 aaKnown RBP5.72□□□□□ -1.49
BDNF-211ENST00000439476 TMEM235A6NFC5 223 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 AQP7O14520 342 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 BCL2L11O43521 198 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 GSTZ1O43708 216 aaPredicted RBP5.72□□□□□ -1.49
BDNF-211ENST00000439476 APOA2P02652 100 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 MBPP02686 304 aaPredicted RBP5.72□□□□□ -1.49
BDNF-211ENST00000439476 HOXC4P09017 264 aaPredicted RBP5.72□□□□□ -1.49
BDNF-211ENST00000439476 GLB1P16278 677 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 OR2B8PP59922 312 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 HSF1Q00613 529 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 OR5I1Q13606 314 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 PCK2Q16822 640 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 PRSS53Q2L4Q9 553 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 TMEM215Q68D42 235 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 Q6ZRG5 221 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 OR2W3Q7Z3T1 314 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 LYG2Q86SG7 212 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 BAGE3Q86Y29 109 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 BAGE2Q86Y30 109 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 MUC20Q8N307 709 aaPredicted RBP5.72□□□□□ -1.49
BDNF-211ENST00000439476 RBMXL3Q8N7X1 1067 aaKnown RBP5.72□□□□□ -1.49
BDNF-211ENST00000439476 LINC01555Q8NAE3 123 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 OR11H4Q8NGC9 324 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 OR1J1Q8NGS3 322 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 BAHD1Q8TBE0 780 aaPredicted RBP5.72□□□□□ -1.49
BDNF-211ENST00000439476 GPBAR1Q8TDU6 330 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 PINX1Q96BK5 328 aaKnown RBP5.72□□□□□ -1.49
BDNF-211ENST00000439476 MRPL38Q96DV4 380 aaKnown RBP5.72□□□□□ -1.49
BDNF-211ENST00000439476 BOD1Q96IK1 185 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 DDA1Q9BW61 102 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 TMEM231Q9H6L2 316 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 SEBOXQ9HB31 216 aaPredicted RBP5.72□□□□□ -1.49
BDNF-211ENST00000439476 DYNLRB1Q9NP97 96 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 HEYLQ9NQ87 328 aaPredicted RBP5.72□□□□□ -1.49
BDNF-211ENST00000439476 GAR1Q9NY12 217 aaKnown RBP5.72□□□□□ -1.49
BDNF-211ENST00000439476 OR5V1Q9UGF6 321 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 POMT1Q9Y6A1 747 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 SIP14410 1827 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 MYO16Q9Y6X6 1858 aa5.72□□□□□ -1.49
BDNF-211ENST00000439476 DOCK3Q8IZD9 2030 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 A0A1B0GW15 77 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 J3QR89 54 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 ARG1P05089 322 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 CRHP06850 196 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 OR8U8P0C7N1 319 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 ABCD3P28288 659 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 CALCRP30988 508 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 AGFG1P52594 562 aaKnown RBP5.71□□□□□ -1.49
BDNF-211ENST00000439476 IL24Q13007 206 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 KLF9Q13886 244 aaPredicted RBP5.71□□□□□ -1.49
BDNF-211ENST00000439476 RUNX2Q13950 521 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 KIRREL2Q6UWL6 708 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 HSD17B13Q7Z5P4 300 aaPredicted RBP5.71□□□□□ -1.49
BDNF-211ENST00000439476 ZNF573Q86YE8 665 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 OR2G2Q8NGZ5 317 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 PPP1R1CQ8WVI7 109 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 NTNG2Q96CW9 530 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 KLHDC3Q9BQ90 382 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 ACTR3CQ9C0K3 210 aaPredicted RBP5.71□□□□□ -1.49
BDNF-211ENST00000439476 C6orf106Q9H6K1 298 aaPredicted RBP5.71□□□□□ -1.49
BDNF-211ENST00000439476 FGF22Q9HCT0 170 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 ZNF331Q9NQX6 463 aaPredicted RBP5.71□□□□□ -1.49
BDNF-211ENST00000439476 WBP1LQ9NX94 342 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 NTMQ9P121 344 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 PIGLQ9Y2B2 252 aa5.71□□□□□ -1.49
BDNF-211ENST00000439476 ZNF638Q14966 1978 aaKnown RBP5.71□□□□□ -1.49
BDNF-211ENST00000439476 ANKRD20A5PA0PJZ0 165 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 CDC14CA4D256 554 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 C5orf52A6NGY3 159 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 HMSDA8MTL9 139 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 IDSB3KWA1 339 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 SLC17A2O00624 439 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 ARPC3O15145 178 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 CTDSPLO15194 276 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 GABRA1P14867 456 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 CPN1P15169 458 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 TCN2P20062 427 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 CAPZBP47756 277 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.71□□□□□ -1.5
BDNF-211ENST00000439476 OR52W1Q6IF63 320 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 SHISA2Q6UWI4 295 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 BTNL8Q6UX41 500 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 LSRQ86X29 649 aaPredicted RBP5.71□□□□□ -1.5
BDNF-211ENST00000439476 HSD17B11Q8NBQ5 300 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 OR52N5Q8NH56 324 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 HPSE2Q8WWQ2 592 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 MTFP1Q9UDX5 166 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 CSAG2Q9Y5P2 127 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 TIMM8AO60220 97 aaPredicted RBP5.71□□□□□ -1.5
BDNF-211ENST00000439476 EN2P19622 333 aaPredicted RBP5.71□□□□□ -1.5
BDNF-211ENST00000439476 CD1CP29017 333 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 EMDP50402 254 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 SLC17A1Q14916 467 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 SHHQ15465 462 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 ZNF239Q16600 458 aaKnown RBP5.71□□□□□ -1.5
BDNF-211ENST00000439476 ACOT6Q3I5F7 207 aaPredicted RBP5.71□□□□□ -1.5
BDNF-211ENST00000439476 TIGITQ495A1 244 aa5.71□□□□□ -1.5
BDNF-211ENST00000439476 VWA1Q6PCB0 445 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms