RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 ASB5Q8WWX0 329 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 UPRTQ96BW1 309 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 WDR89Q96FK6 387 aaPredicted RBP10.88□□□□□ -0.67
TCOF1-205ENST00000439160 RPS10P5Q9NQ39 176 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 V9GYH0 126 aa10.88□□□□□ -0.67
TCOF1-205ENST00000439160 ANKRD36A6QL64 1941 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 ZNF354AO60765 605 aaPredicted RBP10.87□□□□□ -0.67
TCOF1-205ENST00000439160 HBG1P69891 147 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 HBG2P69892 147 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 SSX9Q7RTT3 188 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 RNF133Q8WVZ7 376 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 YIPF5Q969M3 257 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 ADAT1Q9BUB4 502 aaKnown RBP10.87□□□□□ -0.67
TCOF1-205ENST00000439160 ADAM19Q9H013 955 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 SLC17A5Q9NRA2 495 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 KIF25Q9UIL4 384 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 TGFBR3LH3BV60 316 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 GDF9O60383 454 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 NDUFB6O95139 128 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 ZIC2O95409 532 aaPredicted RBP10.87□□□□□ -0.67
TCOF1-205ENST00000439160 GP1BAP07359 652 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 M6PRP20645 277 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 S100PP25815 95 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 PNLIPRP3Q17RR3 467 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 LYG2Q86SG7 212 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 OR2Z1Q8NG97 314 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 PPP1R1CQ8WVI7 109 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 MAP6Q96JE9 813 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 ST6GAL2Q96JF0 529 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 OR5B12Q96R08 314 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 TGIF2Q9GZN2 237 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 SDHAF2Q9NX18 166 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 HEATR5BQ9P2D3 2071 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 RPS4Y1P22090 263 aaKnown RBP10.87□□□□□ -0.67
TCOF1-205ENST00000439160 P2RX3P56373 397 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 SSBP1Q04837 148 aaKnown RBP10.87□□□□□ -0.67
TCOF1-205ENST00000439160 SP6Q3SY56 376 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 CATSPERDQ86XM0 798 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 ARRDC1Q8N5I2 433 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 PLK3Q9H4B4 646 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 ZNF391Q9UJN7 358 aa10.87□□□□□ -0.67
TCOF1-205ENST00000439160 LSM2Q9Y333 95 aaKnown RBP10.87□□□□□ -0.67
TCOF1-205ENST00000439160 IGKV3-11P04433 115 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 HOXA1P49639 335 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-205ENST00000439160 IGLV3-21P80748 117 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-205ENST00000439160 RNF141Q8WVD5 230 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 AMELYQ99218 206 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 QPCTLQ9NXS2 382 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 LNP1A1A4G5 178 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 TOR1AO14656 332 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 TERTO14746 1132 aaKnown RBP10.86□□□□□ -0.67
TCOF1-205ENST00000439160 HMGB3O15347 200 aaKnown RBP10.86□□□□□ -0.67
TCOF1-205ENST00000439160 LRP3O75074 770 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 FTH1P19P0C7X4 201 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 EXOSC2Q13868 293 aaKnown RBP10.86□□□□□ -0.67
TCOF1-205ENST00000439160 MRPL41Q8IXM3 137 aaKnown RBP10.86□□□□□ -0.67
TCOF1-205ENST00000439160 FAM181AQ8N9Y4 354 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 FBXO17Q96EF6 278 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 UBL7Q96S82 380 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-205ENST00000439160 CNTNAP3Q9BZ76 1288 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 NDRG3Q9UGV2 375 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 ST6GALNAC2Q9UJ37 374 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 MMP16P51512 607 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 OR13C8Q8NGS7 320 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 FBLIM1Q8WUP2 373 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 OPA3Q9H6K4 179 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 COL6A6A6NMZ7 2263 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 NKX2-8O15522 239 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 GMDSO60547 372 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 CDC14BO60729 498 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 UPK3AO75631 287 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 SP1P08047 785 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 PEA15Q15121 130 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 OR2W3Q7Z3T1 314 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 SUMF2Q8NBJ7 301 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 APOBEC4Q8WW27 367 aaKnown RBP10.86□□□□□ -0.67
TCOF1-205ENST00000439160 TMED6Q8WW62 240 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 TMPRSS13Q9BYE2 586 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 MAGT1Q9H0U3 335 aa10.86□□□□□ -0.67
TCOF1-205ENST00000439160 A0A0U1RQK1 487 aa10.85□□□□□ -0.67
TCOF1-205ENST00000439160 SNRNP70P08621 437 aaKnown RBP10.85□□□□□ -0.67
TCOF1-205ENST00000439160 HOXD11P31277 338 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-205ENST00000439160 AKR1C1Q04828 323 aa10.85□□□□□ -0.67
TCOF1-205ENST00000439160 ST3GAL2Q16842 350 aa10.85□□□□□ -0.67
TCOF1-205ENST00000439160 TMEM128Q5BJH2 165 aa10.85□□□□□ -0.67
TCOF1-205ENST00000439160 SLC23A3Q6PIS1 610 aa10.85□□□□□ -0.67
TCOF1-205ENST00000439160 GLDNQ6ZMI3 551 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-205ENST00000439160 H2BFWTQ7Z2G1 175 aa10.85□□□□□ -0.67
TCOF1-205ENST00000439160 CLDN23Q96B33 292 aa10.85□□□□□ -0.67
TCOF1-205ENST00000439160 BOD1Q96IK1 185 aa10.85□□□□□ -0.67
TCOF1-205ENST00000439160 TECTBQ96PL2 329 aa10.85□□□□□ -0.67
TCOF1-205ENST00000439160 MTCL1Q9Y4B5 1905 aaKnown RBP10.85□□□□□ -0.67
TCOF1-205ENST00000439160 ATP6V1G2-DDX39BF2Z307 99 aa10.85□□□□□ -0.67
TCOF1-205ENST00000439160 ZNF266Q14584 549 aa10.85□□□□□ -0.67
TCOF1-205ENST00000439160 SMIM21Q3B7S5 101 aa10.85□□□□□ -0.67
TCOF1-205ENST00000439160 ARTNQ5T4W7 220 aa10.85□□□□□ -0.67
TCOF1-205ENST00000439160 GPX8Q8TED1 209 aa10.85□□□□□ -0.67
TCOF1-205ENST00000439160 LOXL4Q96JB6 756 aa10.85□□□□□ -0.67
TCOF1-205ENST00000439160 IL17BQ9UHF5 180 aa10.85□□□□□ -0.67
TCOF1-205ENST00000439160 MDC1Q14676 2089 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms