RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 DAOAP59103 153 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 RHOAP61586 193 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 UBA52P62987 128 aaKnown RBP2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 ACTA1P68133 377 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 PAX5Q02548 391 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 DEFB110Q30KQ9 67 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 KCTD21Q4G0X4 260 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 TSPO2Q5TGU0 170 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 PRAMEF5Q5TYX0 476 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 PRAMEF6Q5VXH4 476 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 ZFAND6Q6FIF0 208 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 ZFP2Q6ZN57 461 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 RUFY3Q7L099 469 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 TAC4Q86UU9 113 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 ACTRT1Q8TDG2 376 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 KCTD4Q8WVF5 259 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 ZNF606Q8WXB4 792 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 STMN2Q93045 179 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 NT5C3BQ969T7 300 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 ISG20Q96AZ6 181 aaKnown RBP2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 STARD4Q96DR4 205 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 ASB9Q96DX5 294 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 FAM210BQ96KR6 192 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 PLIN2Q99541 437 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 ECSITQ9BQ95 431 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 MFFQ9GZY8 342 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 VCXQ9H320 206 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 METTL7AQ9H8H3 244 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 SLC40A1Q9NP59 571 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 NT5MQ9NPB1 228 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 EXD2Q9NVH0 621 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 EXTL2Q9UBQ6 330 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 IKZF2Q9UKS7 526 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 KIAA1257Q9ULG3 409 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 N6AMT1Q9Y5N5 214 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 F11RQ9Y624 299 aaKnown RBP2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 CHD5Q8TDI0 1954 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 PPIAL4EA0A075B759 164 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 IGHV1-45A0A0A0MS14 117 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 A0A1B0GVI7 797 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 FAM240BA0A1B0GVZ2 78 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 A0A1B0GX78 115 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 PEX7O00628 323 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 KMOO15229 486 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 MAGEB4O15481 346 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 IGLV2-23P01705 113 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 FGGP02679 453 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 SERPIND1P05546 499 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 C2P06681 752 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 PPIAL4FP0DN26 164 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 CYB561P49447 251 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 NCBP2P52298 156 aaKnown RBP eCLIP2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 ZNF136P52737 540 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 SUCLG1P53597 346 aaKnown RBP2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 EMP2P54851 167 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 RPL23AP62750 156 aaKnown RBP2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 KCNJ2P63252 427 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 ENPEPQ07075 957 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 BST2Q10589 180 aaKnown RBP2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 TGFBIQ15582 683 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 TAF9Q16594 264 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 BEX5Q5H9J7 111 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 KPRPQ5T749 579 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 ZNF550Q7Z398 422 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 LINC01551Q86U37 167 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 LHFPL3Q86UP9 236 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 CRLF3Q8IUI8 442 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 EGFL6Q8IUX8 553 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 TEX29Q8N6K0 151 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 NECAB1Q8N987 351 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 HSD17B11Q8NBQ5 300 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 OR2L3Q8NG85 312 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 AKR7LQ8NHP1 331 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 ASZ1Q8WWH4 475 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 GIMAP1Q8WWP7 306 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 TUBGCP3Q96CW5 907 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 AURKBQ96GD4 344 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 WFIKKN1Q96NZ8 548 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 PATZ1Q9HBE1 687 aaKnown RBP2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 CTPS2Q9NRF8 586 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 CTSFQ9UBX1 484 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 CD84Q9UIB8 345 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 PSG11Q9UQ72 335 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 CADP27708 2225 aa2.03□□□□□ -2.08
HMGB3P12-201ENST00000438745 ROS1P08922 2347 aa2.02□□□□□ -2.09
HMGB3P12-201ENST00000438745 IGLV4-69A0A075B6H9 119 aa2.02□□□□□ -2.09
HMGB3P12-201ENST00000438745 A0A1W2PPE3 182 aa2.02□□□□□ -2.09
HMGB3P12-201ENST00000438745 GOLGA6L4A6NEF3 574 aa2.02□□□□□ -2.09
HMGB3P12-201ENST00000438745 F6UB75 175 aa2.02□□□□□ -2.09
HMGB3P12-201ENST00000438745 XKRYO14609 159 aa2.02□□□□□ -2.09
HMGB3P12-201ENST00000438745 CLOCKO15516 846 aa2.02□□□□□ -2.09
HMGB3P12-201ENST00000438745 SNAI2O43623 268 aa2.02□□□□□ -2.09
HMGB3P12-201ENST00000438745 REM1O75628 298 aa2.02□□□□□ -2.09
HMGB3P12-201ENST00000438745 UPK3AO75631 287 aa2.02□□□□□ -2.09
HMGB3P12-201ENST00000438745 ZMPSTE24O75844 475 aa2.02□□□□□ -2.09
HMGB3P12-201ENST00000438745 SOD3P08294 240 aa2.02□□□□□ -2.09
HMGB3P12-201ENST00000438745 CT62P0C5K7 136 aa2.02□□□□□ -2.09
HMGB3P12-201ENST00000438745 IGHV3-43DP0DP04 118 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms