RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 A0A0A6YYD4 124 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 TMEM218A2RU14 115 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 OR14I1A6ND48 311 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 TMEM14DPA8MWL7 114 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 SNAPC5O75971 98 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 ACTL6AO96019 429 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 KCNJ3P48549 501 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 GRB2P62993 217 aaKnown RBP12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 RIPPLY1Q0D2K3 151 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 KCNMB1Q16558 191 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 C11orf87Q6NUJ2 197 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 HAGHLQ6PII5 290 aaPredicted RBP12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 OR9K2Q8NGE7 335 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 PGAM5Q96HS1 289 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 ALX4Q9H161 411 aaPredicted RBP12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 NELFAQ9H3P2 528 aa12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 ZNF703Q9H7S9 590 aaPredicted RBP12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 NOP16Q9Y3C1 178 aaKnown RBP12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 MRPS18CQ9Y3D5 142 aaKnown RBP12.15□□□□□ -0.46
PTCHD3-201ENST00000438700 IGKV1-9A0A0C4DH69 117 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 TM4SF5O14894 197 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 NKX2-8O15522 239 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 SOCS1O15524 211 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 GLAP06280 429 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 MELTFP08582 738 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 DBHP09172 617 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 SNTB1Q13884 538 aaKnown RBP12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 MRGPRFQ96AM1 343 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 LPAR5Q9H1C0 372 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 TLNRD1Q9H1K6 362 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 IFT22Q9H7X7 185 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 COA4Q9NYJ1 87 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 FAM166BA8MTA8 275 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 SSX5O60225 188 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 VAMP5O95183 116 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 CELA3AP09093 270 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 H2AFB1P0C5Y9 115 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 NAT2P11245 290 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 HOXA1P49639 335 aaPredicted RBP12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 SUCLG1P53597 346 aaKnown RBP12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 RAC3P60763 192 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 ENDOGQ14249 297 aaKnown RBP12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 MEF2DQ14814 521 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 PAN3Q58A45 887 aaKnown RBP12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 PGAP1Q75T13 922 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 DOK3Q7L591 496 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 FAM219AQ8IW50 185 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 OR5T2Q8NGG2 359 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 LYZL4Q96KX0 146 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 C1orf147Q96MC9 270 aaPredicted RBP12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 B4GALT7Q9UBV7 327 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 ASPMQ8IZT6 3477 aa12.14□□□□□ -0.47
PTCHD3-201ENST00000438700 A0A0D9SG52 128 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 F5H0A9 414 aaPredicted RBP12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 CRTAPO75718 401 aaPredicted RBP12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 PMP2P02689 132 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 RAB13P51153 203 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 GFRA1P56159 465 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 CARD18P57730 90 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 PLEKHN1Q494U1 663 aaPredicted RBP12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 PLAC9Q5JTB6 97 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 TMPRSS7Q7RTY8 843 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 TMEM123Q8N131 208 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 OR5M8Q8NGP6 311 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 NABP1Q96AH0 204 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 PRRT1Q99946 306 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 TMEM59Q9BXS4 323 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 TTTY12Q9BZ98 90 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 OR2AT4A6NND4 320 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 BCL2L11O43521 198 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 CXCL13O43927 109 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 CDC14BO60729 498 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 CD8AP01732 235 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 FAHP16930 419 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 WT1P19544 449 aaPredicted RBP12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 PVALBP20472 110 aaPredicted RBP12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 NFYBP25208 207 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 CD34P28906 385 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 NPBWR1P48145 328 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 LSM6P62312 80 aaKnown RBP12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 GALNTL5Q7Z4T8 443 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 MDS2Q8NDY4 140 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 GJC3Q8NFK1 279 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 OR14K1Q8NGZ2 314 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 OR10D3Q8NH80 312 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 ADGRG7Q96K78 797 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 ULBP2Q9BZM5 246 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 CST11Q9H112 138 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 DLL3Q9NYJ7 618 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 PLEK2Q9NYT0 353 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 NDRG3Q9UGV2 375 aa12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 ZNF107Q9UII5 783 aaPredicted RBP12.13□□□□□ -0.47
PTCHD3-201ENST00000438700 DHHO43323 396 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 DNPH1O43598 174 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 SPP1P10451 314 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 NR2C1P13056 603 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 CCL1P22362 96 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 MAGEA5P43359 124 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 RRADP55042 308 aa12.12□□□□□ -0.47
PTCHD3-201ENST00000438700 CLDN15P56746 228 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms