RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 ZFAND2BQ8WV99 257 aa20.53■□□□□ 0.88
RAPGEF1-206ENST00000438647 AQP3Q92482 292 aa20.53■□□□□ 0.88
RAPGEF1-206ENST00000438647 SLC6A7Q99884 636 aa20.53■□□□□ 0.88
RAPGEF1-206ENST00000438647 WDR13Q9H1Z4 485 aa20.53■□□□□ 0.88
RAPGEF1-206ENST00000438647 GPR173Q9NS66 373 aa20.53■□□□□ 0.88
RAPGEF1-206ENST00000438647 AASSQ9UDR5 926 aa20.53■□□□□ 0.88
RAPGEF1-206ENST00000438647 ANKRD61A6NGH8 418 aa20.52■□□□□ 0.88
RAPGEF1-206ENST00000438647 RHBDL1O75783 438 aa20.52■□□□□ 0.88
RAPGEF1-206ENST00000438647 RCN1Q15293 331 aa20.52■□□□□ 0.88
RAPGEF1-206ENST00000438647 DMRTC1Q5HYR2 192 aa20.52■□□□□ 0.88
RAPGEF1-206ENST00000438647 KLF17Q5JT82 389 aaPredicted RBP20.52■□□□□ 0.88
RAPGEF1-206ENST00000438647 EGFL6Q8IUX8 553 aa20.52■□□□□ 0.88
RAPGEF1-206ENST00000438647 PRSS35Q8N3Z0 413 aa20.52■□□□□ 0.88
RAPGEF1-206ENST00000438647 PACRGLQ8N7B6 248 aa20.52■□□□□ 0.88
RAPGEF1-206ENST00000438647 ST8SIA4Q92187 359 aa20.52■□□□□ 0.88
RAPGEF1-206ENST00000438647 C10orf35Q96D05 121 aa20.52■□□□□ 0.88
RAPGEF1-206ENST00000438647 SEH1LQ96EE3 360 aa20.52■□□□□ 0.88
RAPGEF1-206ENST00000438647 RASSF4Q9H2L5 321 aa20.52■□□□□ 0.88
RAPGEF1-206ENST00000438647 INPP5EQ9NRR6 644 aa20.52■□□□□ 0.88
RAPGEF1-206ENST00000438647 NLKQ9UBE8 527 aa20.52■□□□□ 0.88
RAPGEF1-206ENST00000438647 POLDIP2Q9Y2S7 368 aa20.52■□□□□ 0.88
RAPGEF1-206ENST00000438647 RPL36Q9Y3U8 105 aaKnown RBP20.52■□□□□ 0.88
RAPGEF1-206ENST00000438647 NDUFB3O43676 98 aa20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 GATBO75879 557 aaKnown RBP20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 RGS9O75916 674 aaPredicted RBP20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 VENTXO95231 258 aa20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 SERPINA3P01011 423 aa20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 HAAOP46952 286 aa20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 OR12D2P58182 307 aa20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 RAB40BQ12829 278 aa20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 LRRC10Q5BKY1 277 aa20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 TMEM244Q5VVB8 128 aa20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 RBMS3Q6XE24 437 aaKnown RBP20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 BTN2A1Q7KYR7 527 aa20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 OR2G2Q8NGZ5 317 aa20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 C22orf15Q8WYQ4 148 aa20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 TMIGD2Q96BF3 282 aa20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 SNTG1Q9NSN8 517 aa20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 RASL12Q9NYN1 266 aa20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 SLC7A11Q9UPY5 501 aa20.51■□□□□ 0.87
RAPGEF1-206ENST00000438647 LOC107986453A0A1B0GWG9 222 aa20.5■□□□□ 0.87
RAPGEF1-206ENST00000438647 PQLC2LA1A4F0 135 aa20.5■□□□□ 0.87
RAPGEF1-206ENST00000438647 A6NIN4 97 aa20.5■□□□□ 0.87
RAPGEF1-206ENST00000438647 ZNF879B4DU55 563 aa20.5■□□□□ 0.87
RAPGEF1-206ENST00000438647 J3QT63 122 aa20.5■□□□□ 0.87
RAPGEF1-206ENST00000438647 HTR1AP08908 422 aa20.5■□□□□ 0.87
RAPGEF1-206ENST00000438647 FGF12P61328 243 aa20.5■□□□□ 0.87
RAPGEF1-206ENST00000438647 LRRC36Q1X8D7 754 aa20.5■□□□□ 0.87
RAPGEF1-206ENST00000438647 FDX2Q6P4F2 183 aa20.5■□□□□ 0.87
RAPGEF1-206ENST00000438647 FAM216BQ8N7L0 139 aa20.5■□□□□ 0.87
RAPGEF1-206ENST00000438647 OR5T2Q8NGG2 359 aa20.5■□□□□ 0.87
RAPGEF1-206ENST00000438647 ANGPTL6Q8NI99 470 aa20.5■□□□□ 0.87
RAPGEF1-206ENST00000438647 MED30Q96HR3 178 aa20.5■□□□□ 0.87
RAPGEF1-206ENST00000438647 MS4A7Q9GZW8 240 aaPredicted RBP20.5■□□□□ 0.87
RAPGEF1-206ENST00000438647 AMBNQ9NP70 447 aa20.5■□□□□ 0.87
RAPGEF1-206ENST00000438647 TRAV40A0A0B4J280 105 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 OR2AT4A6NND4 320 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 J3QLW9 94 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 IGHA1P01876 353 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 ZNF19P17023 458 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 KIR3DL2P43630 455 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 TGM4P49221 684 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 CCR9P51686 369 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 IL13RA1P78552 427 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 IKZF1Q13422 519 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 GALEQ14376 348 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 KLHL22Q53GT1 634 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 METTL11BQ5VVY1 283 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 TTC23Q5W5X9 447 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 LPCAT4Q643R3 524 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 ZNF788Q6ZQV5 615 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 POC1AQ8NBT0 407 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 C4orf36Q96KX1 117 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 DMRTB1Q96MA1 342 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 ALG8Q9BVK2 526 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 CHST5Q9GZS9 411 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 MRPS18AQ9NVS2 196 aaKnown RBP20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 ZNF69Q9UC07 566 aa20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 RPUSD1Q9UJJ7 312 aaKnown RBP20.49■□□□□ 0.87
RAPGEF1-206ENST00000438647 H3BSH0 61 aa20.48■□□□□ 0.87
RAPGEF1-206ENST00000438647 TRIM77I1YAP6 450 aa20.48■□□□□ 0.87
RAPGEF1-206ENST00000438647 ISG15P05161 165 aa20.48■□□□□ 0.87
RAPGEF1-206ENST00000438647 IGHV4-38-2P0DP08 117 aa20.48■□□□□ 0.87
RAPGEF1-206ENST00000438647 ELF3P78545 371 aaPredicted RBP20.48■□□□□ 0.87
RAPGEF1-206ENST00000438647 MRPL28Q13084 256 aaKnown RBP20.48■□□□□ 0.87
RAPGEF1-206ENST00000438647 SMIM21Q3B7S5 101 aa20.48■□□□□ 0.87
RAPGEF1-206ENST00000438647 LHFPL3Q86UP9 236 aa20.48■□□□□ 0.87
RAPGEF1-206ENST00000438647 SYS1Q8N2H4 156 aa20.48■□□□□ 0.87
RAPGEF1-206ENST00000438647 PP6455Q8WZ26 134 aa20.48■□□□□ 0.87
RAPGEF1-206ENST00000438647 RNF166Q96A37 237 aaPredicted RBP20.48■□□□□ 0.87
RAPGEF1-206ENST00000438647 PELI1Q96FA3 418 aa20.48■□□□□ 0.87
RAPGEF1-206ENST00000438647 FRRS1LQ9P0K9 344 aa20.48■□□□□ 0.87
RAPGEF1-206ENST00000438647 STAB1Q9NY15 2570 aa20.48■□□□□ 0.87
RAPGEF1-206ENST00000438647 A0A1B0GW55 424 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 SIGLEC5O15389 551 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 FCN3O75636 299 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 TOX4O94842 621 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 PLATP00750 562 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 DUX4L2P0CJ85 424 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 DUX4L3P0CJ86 424 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms