RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 BIVMQ86UB2 503 aa13.55□□□□□ -0.24
SNRPB-202ENST00000438552 ZNF665Q9H7R5 613 aa13.55□□□□□ -0.24
SNRPB-202ENST00000438552 SLC7A11Q9UPY5 501 aa13.55□□□□□ -0.24
SNRPB-202ENST00000438552 ZNF281Q9Y2X9 895 aa13.55□□□□□ -0.24
SNRPB-202ENST00000438552 IGKV1-27A0A075B6S5 117 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 PPIAL4EA0A075B759 164 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 PPIAL4DF5H284 164 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 J3QT63 122 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 SERPINA3P01011 423 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 RPSAP08865 295 aaKnown RBP13.54□□□□□ -0.24
SNRPB-202ENST00000438552 PPIAL4FP0DN26 164 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 ATF1P18846 271 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 AZGP1P25311 298 aaKnown RBP13.54□□□□□ -0.24
SNRPB-202ENST00000438552 HAAOP46952 286 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 ACSM1Q08AH1 577 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 TBCEQ15813 527 aaPredicted RBP13.54□□□□□ -0.24
SNRPB-202ENST00000438552 ZNF404Q494X3 552 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 TMEM155Q4W5P6 130 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 SFRP4Q6FHJ7 346 aaPredicted RBP13.54□□□□□ -0.24
SNRPB-202ENST00000438552 CLEC9AQ6UXN8 241 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 UTS2BQ765I0 119 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 LRRC28Q86X40 367 aaPredicted RBP13.54□□□□□ -0.24
SNRPB-202ENST00000438552 DEFB108BQ8NET1 73 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 AQP3Q92482 292 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 TECTBQ96PL2 329 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 PPIAL4AQ9Y536 164 aa13.54□□□□□ -0.24
SNRPB-202ENST00000438552 IGHV3OR15-7A0A075B7D8 119 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 CEACAM18A8MTB9 384 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 SRRM5B3KS81 715 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 FAM157AC9JC47 383 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.53□□□□□ -0.24
SNRPB-202ENST00000438552 LGALS8O00214 317 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 AKR7A2O43488 359 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 PLPP2O43688 288 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 SYNGR1O43759 233 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 PLATP00750 562 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 LHBP01229 141 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 OCM2P0CE71 109 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 HSMCR30P0CW71 290 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 GZMKP49863 264 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 RPS11P62280 158 aaKnown RBP eCLIP13.53□□□□□ -0.24
SNRPB-202ENST00000438552 ASPHD2Q6ICH7 369 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 Q71RC1 249 aaPredicted RBP13.53□□□□□ -0.24
SNRPB-202ENST00000438552 ANGPTL5Q86XS5 388 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 ZNF573Q86YE8 665 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 CALHM1Q8IU99 346 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 MUC20Q8N307 709 aaPredicted RBP13.53□□□□□ -0.24
SNRPB-202ENST00000438552 SPICQ8N5J4 248 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 PARP16Q8N5Y8 322 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 TMEM106AQ96A25 262 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 ORAI1Q96D31 301 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 RAB39BQ96DA2 213 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 MSI2Q96DH6 328 aaKnown RBP13.53□□□□□ -0.24
SNRPB-202ENST00000438552 SEH1LQ96EE3 360 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 BORCS8Q96FH0 119 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 OR14A2Q96R54 314 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 TMEM246Q9BRR3 403 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 ZCCHC4Q9H5U6 513 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 TMEM165Q9HC07 324 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 TAS2R4Q9NYW5 299 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.53□□□□□ -0.243e-7■■■■□ 19.9
SNRPB-202ENST00000438552 TLN2Q9Y4G6 2542 aa13.53□□□□□ -0.24
SNRPB-202ENST00000438552 ABCA1O95477 2261 aa13.52□□□□□ -0.24
SNRPB-202ENST00000438552 TRBV5-5A0A0J9YX44 114 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 OOEPA6NGQ2 149 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 SULT1B1O43704 296 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 CD2P06729 351 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 HEXAP06865 529 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 OCMP0CE72 109 aaPredicted RBP13.52□□□□□ -0.25
SNRPB-202ENST00000438552 CFHR2P36980 270 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 FUT6P51993 359 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 YIF1BQ5BJH7 314 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 FAM90A1Q86YD7 464 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 SERPINA12Q8IW75 414 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 BATF2Q8N1L9 274 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 OR10Z1Q8NGY1 313 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 RFT1Q96AA3 541 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 SPSB1Q96BD6 273 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 ZNF488Q96MN9 340 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 OPALINQ96PE5 141 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 SPACA5Q96QH8 159 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 YTHDF1Q9BYJ9 559 aaKnown RBP13.52□□□□□ -0.25
SNRPB-202ENST00000438552 WDR13Q9H1Z4 485 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 LPAR2Q9HBW0 351 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 ACOT13Q9NPJ3 140 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 PCDHB10Q9UN67 800 aa13.52□□□□□ -0.25
SNRPB-202ENST00000438552 MALRD1Q5VYJ5 2156 aa13.51□□□□□ -0.25
SNRPB-202ENST00000438552 F5H0A9 414 aaPredicted RBP13.51□□□□□ -0.25
SNRPB-202ENST00000438552 CD5LO43866 347 aa13.51□□□□□ -0.25
SNRPB-202ENST00000438552 FSTL3O95633 263 aa13.51□□□□□ -0.25
SNRPB-202ENST00000438552 GYPAP02724 150 aa13.51□□□□□ -0.25
SNRPB-202ENST00000438552 CD1AP06126 327 aa13.51□□□□□ -0.25
SNRPB-202ENST00000438552 RPS2P15880 293 aaKnown RBP13.51□□□□□ -0.25
SNRPB-202ENST00000438552 PRKACBP22694 351 aa13.51□□□□□ -0.25
SNRPB-202ENST00000438552 RBP2P50120 134 aa13.51□□□□□ -0.25
SNRPB-202ENST00000438552 SEC61A1P61619 476 aaKnown RBP13.51□□□□□ -0.25
SNRPB-202ENST00000438552 Q499Y3 187 aa13.51□□□□□ -0.25
SNRPB-202ENST00000438552 LIPKQ5VXJ0 399 aa13.51□□□□□ -0.25
SNRPB-202ENST00000438552 TEX36Q5VZQ5 186 aa13.51□□□□□ -0.25
SNRPB-202ENST00000438552 LYPD2Q6UXB3 125 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms