RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 PTTG3PQ9NZH4 202 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 SPTA1P02549 2419 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 TLN1Q9Y490 2541 aaKnown RBP8.29□□□□□ -1.08
CUX1-206ENST00000437600 FAM230AA0A1W2PPH8 454 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 C5orf51A6NDU8 294 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 ETV2O00321 342 aaPredicted RBP8.29□□□□□ -1.08
CUX1-206ENST00000437600 ADAP1O75689 374 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 EIF1P41567 113 aaKnown RBP8.29□□□□□ -1.08
CUX1-206ENST00000437600 DSCR4P56555 118 aaPredicted RBP8.29□□□□□ -1.08
CUX1-206ENST00000437600 SLC35A1P78382 337 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 ENDOGQ14249 297 aaKnown RBP8.29□□□□□ -1.08
CUX1-206ENST00000437600 TFAP2EQ6VUC0 442 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 ABHD3Q8WU67 409 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 WBP1Q96G27 269 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 C1orf147Q96MC9 270 aaPredicted RBP8.29□□□□□ -1.08
CUX1-206ENST00000437600 DDA1Q9BW61 102 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 TMEM59Q9BXS4 323 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 REG4Q9BYZ8 158 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 ULBP2Q9BZM5 246 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 SH2D2AQ9NP31 389 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 PPP1R14DQ9NXH3 145 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 NBASA2RRP1 2371 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 MFSD2BA6NFX1 497 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 CDC14BO60729 498 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 KNG1P01042 644 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 SERPINA7P05543 415 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 WT1P19544 449 aaPredicted RBP8.28□□□□□ -1.08
CUX1-206ENST00000437600 BLVRBP30043 206 aaPredicted RBP8.28□□□□□ -1.08
CUX1-206ENST00000437600 HGFACQ04756 655 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 NHLRC3Q5JS37 347 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 C16orf54Q6UWD8 224 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 STPG2Q8N412 459 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 OR9K2Q8NGE7 335 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 UTP23Q9BRU9 249 aaKnown RBP8.28□□□□□ -1.08
CUX1-206ENST00000437600 ICE1Q9Y2F5 2266 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 IGKV1D-8A0A087WSZ0 117 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 LRRC3CA6NJW4 275 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 DHHO43323 396 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 TLX3O43711 291 aaPredicted RBP8.28□□□□□ -1.08
CUX1-206ENST00000437600 CBR3O75828 277 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 HPP00738 406 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 GLAP06280 429 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 GLRA1P23415 457 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 ACKR3P25106 362 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 SCAND1P57086 179 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 DCAF10Q5QP82 559 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 NKAIN3Q8N8D7 197 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 LDAHQ9H6V9 325 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 ACKR4Q9NPB9 350 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 SLC17A5Q9NRA2 495 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 ZNF701Q9NV72 531 aaPredicted RBP8.28□□□□□ -1.08
CUX1-206ENST00000437600 KIF25Q9UIL4 384 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 TINAGQ9UJW2 476 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 HDGFL3Q9Y3E1 203 aa8.28□□□□□ -1.08
CUX1-206ENST00000437600 A0A096LPE4 126 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 A0A1W2PPZ6 126 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 TMEM14DPA8MWL7 114 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 MSR1P21757 451 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 OPRM1P35372 400 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 MECP2P51608 486 aaKnown RBP8.27□□□□□ -1.08
CUX1-206ENST00000437600 AKR1C2P52895 323 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 SNU13P55769 128 aaKnown RBP8.27□□□□□ -1.08
CUX1-206ENST00000437600 CLDN15P56746 228 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 CARD18P57730 90 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 AKR1C1Q04828 323 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 EIF3IQ13347 325 aaKnown RBP8.27□□□□□ -1.08
CUX1-206ENST00000437600 TAF9Q16594 264 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 HIST3H3Q16695 136 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 CRIP3Q6Q6R5 217 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 GSG1LQ6UXU4 331 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 BEND4Q6ZU67 534 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 TMPRSS7Q7RTY8 843 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 OR14K1Q8NGZ2 314 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 SGCZQ96LD1 299 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 SLC6A15Q9H2J7 730 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 ASCL3Q9NQ33 180 aa8.27□□□□□ -1.08
CUX1-206ENST00000437600 TNRC6AQ8NDV7 1962 aaKnown RBP8.27□□□□□ -1.09
CUX1-206ENST00000437600 CACNA1DQ01668 2161 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 C9orf170A2RU37 121 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 DISC1C4P0D8 188 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 M0R135 149 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 EFSO43281 561 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 RP2O75695 350 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 PMS2P2O95744 297 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 APOC3P02656 99 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 LCATP04180 440 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 NMBP08949 121 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 TMEM225BP0DP42 221 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 PTGFRP43088 359 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 FOXG1P55316 489 aaPredicted RBP8.27□□□□□ -1.09
CUX1-206ENST00000437600 C3AR1Q16581 482 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 ABHD17BQ5VST6 288 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 ZNF660Q6AZW8 331 aaPredicted RBP8.27□□□□□ -1.09
CUX1-206ENST00000437600 ATRAIDQ6UW56 229 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 TMEM200AQ86VY9 491 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 OR6S1Q8NH40 331 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 THRSPQ92748 146 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 WNT2BQ93097 391 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 FOXRED1Q96CU9 486 aaPredicted RBP8.27□□□□□ -1.09
CUX1-206ENST00000437600 ZNF799Q96GE5 643 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms