RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 RAP2AP10114 183 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 SELLP14151 372 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 HOXB6P17509 224 aaKnown RBP6.36□□□□□ -1.39
VPS50-203ENST00000436177 TGM4P49221 684 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 LGALS4P56470 323 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 CAV3P56539 151 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 GNGT1P63211 74 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 ELF3P78545 371 aaPredicted RBP6.36□□□□□ -1.39
VPS50-203ENST00000436177 PRB3Q04118 309 aaPredicted RBP6.36□□□□□ -1.39
VPS50-203ENST00000436177 ZNF829Q3KNS6 432 aaPredicted RBP6.36□□□□□ -1.39
VPS50-203ENST00000436177 ATPAF1Q5TC12 328 aaPredicted RBP6.36□□□□□ -1.39
VPS50-203ENST00000436177 LINC01590Q5TEZ4 76 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 LCN1P1Q5VSP4 162 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 PLCXD3Q63HM9 321 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 LCN8Q6JVE9 175 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 PLBD1Q6P4A8 553 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 C1orf122Q6ZSJ8 110 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 Q6ZSV7 163 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 C1QL4Q86Z23 238 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 FGFRL1Q8N441 504 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 LY6G5BQ8NDX9 201 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 OR2T6Q8NHC8 308 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 OTOSQ8NHW6 89 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 C8orf46Q8TAG6 207 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 ZNF671Q8TAW3 534 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 OR5P3Q8WZ94 311 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 DUS3LQ96G46 650 aaKnown RBP6.36□□□□□ -1.39
VPS50-203ENST00000436177 GAFA1Q96PS6 74 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 NPFFR1Q9GZQ6 430 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 TLNRD1Q9H1K6 362 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 C16orf95Q9H693 158 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 HEXA-AS1Q9H8Q6 139 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.36□□□□□ -1.39
VPS50-203ENST00000436177 GTF2A1LQ9UNN4 478 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 NOTCH3Q9UM47 2321 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 ARRDC5A6NEK1 342 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 B2RBV5 119 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 ATP8B1O43520 1251 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 TSPAN9O75954 239 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 ACAA1P09110 424 aaPredicted RBP6.35□□□□□ -1.39
VPS50-203ENST00000436177 ACKR3P25106 362 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 ESRRGP62508 458 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 TRIM25Q14258 630 aaKnown RBP6.35□□□□□ -1.39
VPS50-203ENST00000436177 HERPUD1Q15011 391 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 LY6EQ16553 131 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 DGUOKQ16854 277 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 LRRC75BQ2VPJ9 315 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 ZNF684Q5T5D7 378 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 KCTD18Q6PI47 426 aaPredicted RBP6.35□□□□□ -1.39
VPS50-203ENST00000436177 CD300LDQ6UXZ3 194 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 ZNF788Q6ZQV5 615 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 PRSS45Q7RTY3 260 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 C11orf53Q8IXP5 236 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 PNKDQ8N490 385 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 BEND2Q8NDZ0 799 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 OR8B12Q8NGG6 310 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 ANGPTL6Q8NI99 470 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 ITFG2Q969R8 447 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 AMELYQ99218 206 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 FEVQ99581 238 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 NKX3-1Q99801 234 aaPredicted RBP6.35□□□□□ -1.39
VPS50-203ENST00000436177 SSX3Q99909 188 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 MROQ9BYG7 248 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 PRRG3Q9BZD7 231 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 C1orf21Q9H246 121 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 YY1AP1Q9H869 796 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 ELL3Q9HB65 397 aaPredicted RBP6.35□□□□□ -1.39
VPS50-203ENST00000436177 VNN3Q9NY84 501 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 IKZF2Q9UKS7 526 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 POLDIP2Q9Y2S7 368 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 LRP12Q9Y561 859 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 TMEM14AQ9Y6G1 99 aa6.35□□□□□ -1.39
VPS50-203ENST00000436177 KRTAP4-8A0A0G2JLE6 195 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 A0A0U1RQV5 110 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 TMEM269A0A1B0GVZ9 245 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 TCRBV5S2A0A599 114 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 ACOD1A6NK06 481 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 ZNF732B4DXR9 585 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 PEX14O75381 377 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 MTRF1O75570 445 aaKnown RBP6.34□□□□□ -1.39
VPS50-203ENST00000436177 FCN3O75636 299 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 NXPH2O95156 264 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 ATP6V1B1P15313 513 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 COX7A1P24310 79 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 DLX1P56177 255 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 KRTAP10-3P60369 221 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 RPL31P62899 125 aaKnown RBP6.34□□□□□ -1.39
VPS50-203ENST00000436177 CBX1P83916 185 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 RIPPLY1Q0D2K3 151 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 GINS1Q14691 196 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 CEACAM21Q3KPI0 293 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 CEP78Q5JTW2 689 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 SLC35D3Q5M8T2 416 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 SLC35E4Q6ICL7 350 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 HAGHLQ6PII5 290 aaPredicted RBP6.34□□□□□ -1.39
VPS50-203ENST00000436177 ZNF573Q86YE8 665 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 CPOQ8IVL8 374 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 Q8N7P7 452 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 ZNRF1Q8ND25 227 aa6.34□□□□□ -1.39
VPS50-203ENST00000436177 HPSE2Q8WWQ2 592 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms