RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 TREM2Q9NZC2 230 aa7.13□□□□□ -1.27
VTI1A-202ENST00000432306 DHCR7Q9UBM7 475 aaKnown RBP7.13□□□□□ -1.27
VTI1A-202ENST00000432306 MIOXQ9UGB7 285 aa7.13□□□□□ -1.27
VTI1A-202ENST00000432306 RAB22AQ9UL26 194 aa7.13□□□□□ -1.27
VTI1A-202ENST00000432306 KCNK6Q9Y257 313 aa7.13□□□□□ -1.27
VTI1A-202ENST00000432306 MRPS18BQ9Y676 258 aaKnown RBP7.13□□□□□ -1.27
VTI1A-202ENST00000432306 WNT6Q9Y6F9 365 aa7.13□□□□□ -1.27
VTI1A-202ENST00000432306 CACNA1EQ15878 2313 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 C13orf42A0A1B0GVH6 325 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 WIPF3A6NGB9 483 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 SERINC4A6NH21 518 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 ZNF860A6NHJ4 632 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 ZNF705EA8MWA4 302 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-202ENST00000432306 CCSO14618 274 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 KCNAB3O43448 404 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 CTSVO60911 334 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 LCATP04180 440 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 CEACAM5P06731 702 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 OR8U8P0C7N1 319 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 PET100P0DJ07 73 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 NFYBP25208 207 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 CCKBRP32239 447 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 DRD3P35462 400 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 EIF2S3P41091 472 aaKnown RBP7.12□□□□□ -1.27
VTI1A-202ENST00000432306 VIPR2P41587 438 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 GLP1RP43220 463 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 CD81P60033 236 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 IGLV3-21P80748 117 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-202ENST00000432306 QRFPP83859 136 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 GPR18Q14330 331 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 USF2Q15853 346 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-202ENST00000432306 LRRC37A5PQ49AS3 106 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 HIKESHIQ53FT3 197 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 ACTBL2Q562R1 376 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 ALG10Q5BKT4 473 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 LCE2AQ5TA79 106 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-202ENST00000432306 OR10K2Q6IF99 312 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 DHRS11Q6UWP2 260 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 RBMS3Q6XE24 437 aaKnown RBP7.12□□□□□ -1.27
VTI1A-202ENST00000432306 COLCA1Q6ZS62 124 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 SLC16A13Q7RTY0 426 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 CATSPERDQ86XM0 798 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 WFDC8Q8IUA0 241 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 OR4N5Q8IXE1 308 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 OCC1Q8TAD7 63 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 NUBPLQ8TB37 319 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 TCTEX1D2Q8WW35 142 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 TMED6Q8WW62 240 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 FAM131CQ96AQ9 280 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 ANKRD9Q96BM1 317 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-202ENST00000432306 SNRNP40Q96DI7 357 aaKnown RBP7.12□□□□□ -1.27
VTI1A-202ENST00000432306 MICU1Q9BPX6 476 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 SCRT1Q9BWW7 348 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 SMDT1Q9H4I9 107 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 FN3KRPQ9HA64 309 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 TMEM9BQ9NQ34 198 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 CKLFQ9UBR5 152 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 GPR132Q9UNW8 380 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 TMED7Q9Y3B3 224 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 OR1A2Q9Y585 309 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 GCN1Q92616 2671 aaKnown RBP7.12□□□□□ -1.27
VTI1A-202ENST00000432306 GON4LQ3T8J9 2241 aa7.12□□□□□ -1.27
VTI1A-202ENST00000432306 A0A1B0GTH9 108 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 A0A1B0GW64 132 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 MEIS3P1A6NDR6 274 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 NPIPB13A6NJU9 1138 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 NPIPB4C9JG80 1138 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 AP4M1O00189 453 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 ZNF264O43296 627 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 RENP00797 406 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 ERCC1P07992 297 aaPredicted RBP7.11□□□□□ -1.27
VTI1A-202ENST00000432306 STAG3L2P0CL84 134 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 AQP2P41181 271 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 HTR5AP47898 357 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 CTXN1P60606 82 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 RPL23AP62750 156 aaKnown RBP7.11□□□□□ -1.27
VTI1A-202ENST00000432306 BTG2P78543 158 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 FAM3AP98173 230 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 ID3Q02535 119 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 MZT1Q08AG7 82 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 RHEBQ15382 184 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 ZNHIT3Q15649 155 aaPredicted RBP7.11□□□□□ -1.27
VTI1A-202ENST00000432306 SSX2Q16385 188 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 SGCAQ16586 387 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 ITPRIPL2Q3MIP1 535 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 DEFB134Q4QY38 66 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 AGBL4Q5VU57 503 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 TCEAL6Q6IPX3 200 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 DPY19L4Q7Z388 723 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 CENPVQ7Z7K6 275 aaPredicted RBP7.11□□□□□ -1.27
VTI1A-202ENST00000432306 OR52R1Q8NGF1 315 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 OR56B1Q8NGI3 324 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 OR6N2Q8NGY6 317 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 DCUN1D4Q92564 292 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 MISP3Q96FF7 219 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 KIRREL1Q96J84 757 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 TSPAN32Q96QS1 320 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 PAPOLGQ9BWT3 736 aaKnown RBP7.11□□□□□ -1.27
VTI1A-202ENST00000432306 ARV1Q9H2C2 271 aa7.11□□□□□ -1.27
VTI1A-202ENST00000432306 GHRLQ9UBU3 117 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms