RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 TUBB1Q9H4B7 451 aa8.88□□□□□ -0.99
FN1-209ENST00000432072 OR2M5A3KFT3 312 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 METTL15P1P0C7V9 234 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 CCL3P10147 92 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 NUBP1P53384 320 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 ZNF528Q3MIS6 628 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 OTUD1Q5VV17 481 aaPredicted RBP8.87□□□□□ -0.99
FN1-209ENST00000432072 MMP28Q9H239 520 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 CISD1Q9NZ45 108 aaKnown RBP8.87□□□□□ -0.99
FN1-209ENST00000432072 A0A1W2PN81 502 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 ELK1P19419 428 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 CHRNA7P36544 502 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 TBCEQ15813 527 aaPredicted RBP8.87□□□□□ -0.99
FN1-209ENST00000432072 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 MOGAT3Q86VF5 341 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 DDOQ99489 341 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 ATP5SQ99766 215 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 K7ESF4 209 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 GLI4P10075 376 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 EMX1Q04741 257 aaPredicted RBP8.87□□□□□ -0.99
FN1-209ENST00000432072 PTP4A1Q93096 173 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 TXNL4BQ9NX01 149 aaKnown RBP8.87□□□□□ -0.99
FN1-209ENST00000432072 ICAM5Q9UMF0 924 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 AQP8O94778 261 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 CASP3P42574 277 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 C1QL3Q5VWW1 255 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 RPL7L1Q6DKI1 246 aaKnown RBP8.87□□□□□ -0.99
FN1-209ENST00000432072 MLF1P58340 268 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 IAH1Q2TAA2 248 aaPredicted RBP8.87□□□□□ -0.99
FN1-209ENST00000432072 SH2D5Q6ZV89 423 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 ZNRF4Q8WWF5 429 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 SLC25A21Q9BQT8 299 aaPredicted RBP8.87□□□□□ -0.99
FN1-209ENST00000432072 UPK1BO75841 260 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 ACOT6Q3I5F7 207 aaPredicted RBP8.87□□□□□ -0.99
FN1-209ENST00000432072 INO80CQ6PI98 192 aaPredicted RBP8.87□□□□□ -0.99
FN1-209ENST00000432072 PLSCR3Q9NRY6 295 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 ING1Q9UK53 422 aaPredicted RBP8.87□□□□□ -0.99
FN1-209ENST00000432072 SPINT1O43278 529 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 IGHV4-34P06331 123 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 GDNFP39905 211 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 MDH2P40926 338 aaKnown RBP8.87□□□□□ -0.99
FN1-209ENST00000432072 GFRA1P56159 465 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 OR13C8Q8NGS7 320 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 SLC25A40Q8TBP6 338 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 SPSB1Q96BD6 273 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 SLC29A1Q99808 456 aa8.87□□□□□ -0.99
FN1-209ENST00000432072 MEX3AA1L020 520 aaKnown RBP8.86□□□□□ -0.99
FN1-209ENST00000432072 SLC31A2O15432 143 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 CDH26Q8IXH8 852 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 MUC20Q8N307 709 aaPredicted RBP8.86□□□□□ -0.99
FN1-209ENST00000432072 DIMT1Q9UNQ2 313 aaKnown RBP8.86□□□□□ -0.99
FN1-209ENST00000432072 A0A0B4J2A0 478 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 APOC3P02656 99 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 SMN1Q16637 294 aaKnown RBP8.86□□□□□ -0.99
FN1-209ENST00000432072 SSX7Q7RTT5 188 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 DNASE2BQ8WZ79 361 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 PFDN5Q99471 154 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 LRFN3Q9BTN0 628 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 BCL2L10Q9HD36 194 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 EXOSC3Q9NQT5 275 aaKnown RBP8.86□□□□□ -0.99
FN1-209ENST00000432072 LPAR3Q9UBY5 353 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 SHPKQ9UHJ6 478 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 FITM1A5D6W6 292 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 ZNF260Q3ZCT1 412 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 PELI3Q8N2H9 469 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 DCTN5Q9BTE1 182 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 IGHV3-13P01766 116 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 IGHV3-7P01780 117 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 MGMTP16455 207 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 VDAC1P21796 283 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 CCDC144NLQ6NUI1 221 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 SEC14L6B5MCN3 397 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 CYR61O00622 381 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 CD96P40200 585 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 RPS27P42677 84 aaKnown RBP8.86□□□□□ -0.99
FN1-209ENST00000432072 TIGITQ495A1 244 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 SKA3Q8IX90 412 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 SAP25Q8TEE9 199 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 APH1BQ8WW43 257 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 ZNF665Q9H7R5 613 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 LRP12Q9Y561 859 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 OR5B21A6NL26 309 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 IAPPP10997 89 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 SLC25A6P12236 298 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 OR8U1Q8NH10 309 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 SIRT3Q9NTG7 399 aaPredicted RBP8.86□□□□□ -0.99
FN1-209ENST00000432072 PSORS1C1Q9UIG5 152 aa8.86□□□□□ -0.99
FN1-209ENST00000432072 KMT2EQ8IZD2 1858 aa8.85□□□□□ -0.99
FN1-209ENST00000432072 RER1O15258 196 aa8.85□□□□□ -0.99
FN1-209ENST00000432072 GAB4Q2WGN9 574 aa8.85□□□□□ -0.99
FN1-209ENST00000432072 HIKESHIQ53FT3 197 aa8.85□□□□□ -0.99
FN1-209ENST00000432072 ZNF547Q8IVP9 402 aa8.85□□□□□ -0.99
FN1-209ENST00000432072 RNF7Q9UBF6 113 aa8.85□□□□□ -0.99
FN1-209ENST00000432072 RNF115Q9Y4L5 304 aa8.85□□□□□ -0.99
FN1-209ENST00000432072 PLPP3O14495 311 aa8.85□□□□□ -0.99
FN1-209ENST00000432072 NKX2-2O95096 273 aa8.85□□□□□ -0.99
FN1-209ENST00000432072 PTTG1O95997 202 aa8.85□□□□□ -0.99
FN1-209ENST00000432072 GCAP28676 217 aa8.85□□□□□ -0.99
FN1-209ENST00000432072 TOMM34Q15785 309 aaPredicted RBP8.85□□□□□ -0.99
FN1-209ENST00000432072 DESI1Q6ICB0 168 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms