RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ITPKCQ96DU7 683 aa15.58■□□□□ 0.09
HMGN1-206ENST00000431390 SOSTQ9BQB4 213 aa15.58■□□□□ 0.09
HMGN1-206ENST00000431390 RHBDL2Q9NX52 303 aa15.58■□□□□ 0.09
HMGN1-206ENST00000431390 EXTL2Q9UBQ6 330 aa15.58■□□□□ 0.09
HMGN1-206ENST00000431390 NOP16Q9Y3C1 178 aaKnown RBP15.58■□□□□ 0.09
HMGN1-206ENST00000431390 PKDREJQ9NTG1 2253 aa15.58■□□□□ 0.08
HMGN1-206ENST00000431390 IGKV1-27A0A075B6S5 117 aa15.58■□□□□ 0.08
HMGN1-206ENST00000431390 PQLC2LA1A4F0 135 aa15.58■□□□□ 0.08
HMGN1-206ENST00000431390 TUBAL3A6NHL2 446 aa15.58■□□□□ 0.08
HMGN1-206ENST00000431390 OR5B21A6NL26 309 aa15.58■□□□□ 0.08
HMGN1-206ENST00000431390 NAT2P11245 290 aa15.58■□□□□ 0.08
HMGN1-206ENST00000431390 RAB6AP20340 208 aa15.58■□□□□ 0.08
HMGN1-206ENST00000431390 FABP6P51161 128 aa15.58■□□□□ 0.08
HMGN1-206ENST00000431390 ZP1P60852 638 aa15.58■□□□□ 0.08
HMGN1-206ENST00000431390 ALKBH6Q3KRA9 238 aa15.58■□□□□ 0.08
HMGN1-206ENST00000431390 GLIPR1L1Q6UWM5 242 aa15.58■□□□□ 0.08
HMGN1-206ENST00000431390 OR2W3Q7Z3T1 314 aa15.58■□□□□ 0.08
HMGN1-206ENST00000431390 CMTM4Q8IZR5 234 aa15.58■□□□□ 0.08
HMGN1-206ENST00000431390 LINC01560Q8TB33 94 aa15.58■□□□□ 0.08
HMGN1-206ENST00000431390 RFT1Q96AA3 541 aa15.58■□□□□ 0.08
HMGN1-206ENST00000431390 SLC22A4Q9H015 551 aa15.58■□□□□ 0.08
HMGN1-206ENST00000431390 ADGRG4Q8IZF6 3080 aa15.57■□□□□ 0.08
HMGN1-206ENST00000431390 POLQO75417 2590 aa15.57■□□□□ 0.08
HMGN1-206ENST00000431390 TIMM8AO60220 97 aaPredicted RBP15.57■□□□□ 0.08
HMGN1-206ENST00000431390 IGHV3-13P01766 116 aa15.57■□□□□ 0.08
HMGN1-206ENST00000431390 CA6P23280 308 aa15.57■□□□□ 0.08
HMGN1-206ENST00000431390 MMP15P51511 669 aa15.57■□□□□ 0.08
HMGN1-206ENST00000431390 QRFPP83859 136 aa15.57■□□□□ 0.08
HMGN1-206ENST00000431390 SLC22A25Q6T423 547 aa15.57■□□□□ 0.08
HMGN1-206ENST00000431390 FAM131AQ6UXB0 335 aa15.57■□□□□ 0.08
HMGN1-206ENST00000431390 TNFAIP8L1Q8WVP5 186 aa15.57■□□□□ 0.08
HMGN1-206ENST00000431390 LURAP1Q96LR2 239 aa15.57■□□□□ 0.08
HMGN1-206ENST00000431390 C1orf147Q96MC9 270 aaPredicted RBP15.57■□□□□ 0.08
HMGN1-206ENST00000431390 ZNF442Q9H7R0 627 aa15.57■□□□□ 0.08
HMGN1-206ENST00000431390 TMEM100Q9NV29 134 aa15.57■□□□□ 0.08
HMGN1-206ENST00000431390 RABL2AQ9UBK7 228 aaPredicted RBP15.57■□□□□ 0.08
HMGN1-206ENST00000431390 RABL2BQ9UNT1 228 aa15.57■□□□□ 0.08
HMGN1-206ENST00000431390 KLF2Q9Y5W3 355 aaPredicted RBP15.57■□□□□ 0.08
HMGN1-206ENST00000431390 IGLV3-9A0A075B6K5 115 aa15.56■□□□□ 0.08
HMGN1-206ENST00000431390 TMEM14DPA8MWL7 114 aa15.56■□□□□ 0.08
HMGN1-206ENST00000431390 VSIG8P0DPA2 414 aa15.56■□□□□ 0.08
HMGN1-206ENST00000431390 KLF3P57682 345 aaPredicted RBP15.56■□□□□ 0.08
HMGN1-206ENST00000431390 GNG3P63215 75 aa15.56■□□□□ 0.08
HMGN1-206ENST00000431390 ZNF79Q15937 498 aa15.56■□□□□ 0.08
HMGN1-206ENST00000431390 BAIAP2L2Q6UXY1 529 aa15.56■□□□□ 0.08
HMGN1-206ENST00000431390 OR4M1Q8NGD0 313 aa15.56■□□□□ 0.08
HMGN1-206ENST00000431390 OR5D18Q8NGL1 313 aa15.56■□□□□ 0.08
HMGN1-206ENST00000431390 S100A16Q96FQ6 103 aaKnown RBP15.56■□□□□ 0.08
HMGN1-206ENST00000431390 S100A13Q99584 98 aa15.56■□□□□ 0.08
HMGN1-206ENST00000431390 MICU1Q9BPX6 476 aa15.56■□□□□ 0.08
HMGN1-206ENST00000431390 ADAT1Q9BUB4 502 aaKnown RBP15.56■□□□□ 0.08
HMGN1-206ENST00000431390 RTL8AQ9BWD3 113 aa15.56■□□□□ 0.08
HMGN1-206ENST00000431390 FGF23Q9GZV9 251 aaPredicted RBP15.56■□□□□ 0.08
HMGN1-206ENST00000431390 RAB22AQ9UL26 194 aa15.56■□□□□ 0.08
HMGN1-206ENST00000431390 CADP27708 2225 aa15.56■□□□□ 0.08
HMGN1-206ENST00000431390 MED13LQ71F56 2210 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 CELSR1Q9NYQ6 3014 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 A0A1B0GWJ7 208 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 ZNF732B4DXR9 585 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 J3QRK9 145 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 NR4A2P43354 598 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 GPM6AP51674 278 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 SELENOVP59797 346 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 DCTN2Q13561 401 aaKnown RBP15.55■□□□□ 0.08
HMGN1-206ENST00000431390 SNTB1Q13884 538 aaKnown RBP15.55■□□□□ 0.08
HMGN1-206ENST00000431390 MSMPQ1L6U9 139 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 BEX5Q5H9J7 111 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 ASCL4Q6XD76 172 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 ZSCAN4Q8NAM6 433 aaPredicted RBP15.55■□□□□ 0.08
HMGN1-206ENST00000431390 PXT1Q8NFP0 134 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 OR8S1Q8NH09 359 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 KCNG3Q8TAE7 436 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 PLPPR2Q96GM1 343 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 RNF170Q96K19 258 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 CST11Q9H112 138 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 KCNK15Q9H427 330 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 NPDC1Q9NQX5 325 aaPredicted RBP15.55■□□□□ 0.08
HMGN1-206ENST00000431390 CA10Q9NS85 328 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 ITGB1BP2Q9UKP3 347 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 FZR1Q9UM11 496 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 AKAP9Q99996 3911 aa15.55■□□□□ 0.08
HMGN1-206ENST00000431390 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.54■□□□□ 0.08
HMGN1-206ENST00000431390 CD3EP07766 207 aa15.54■□□□□ 0.08
HMGN1-206ENST00000431390 TMEM225BP0DP42 221 aa15.54■□□□□ 0.08
HMGN1-206ENST00000431390 EFNB2P52799 333 aa15.54■□□□□ 0.08
HMGN1-206ENST00000431390 PLA2G7Q13093 441 aa15.54■□□□□ 0.08
HMGN1-206ENST00000431390 PDZK1IP1Q13113 114 aa15.54■□□□□ 0.08
HMGN1-206ENST00000431390 IL18Q14116 193 aa15.54■□□□□ 0.08
HMGN1-206ENST00000431390 VHLLQ6RSH7 139 aa15.54■□□□□ 0.08
HMGN1-206ENST00000431390 OR13G1Q8NGZ3 307 aa15.54■□□□□ 0.08
HMGN1-206ENST00000431390 DVL3Q92997 716 aaPredicted RBP15.54■□□□□ 0.08
HMGN1-206ENST00000431390 MRPL24Q96A35 216 aaKnown RBP15.54■□□□□ 0.08
HMGN1-206ENST00000431390 SRRQ9GZT4 340 aa15.54■□□□□ 0.08
HMGN1-206ENST00000431390 PALMDQ9NP74 551 aa15.54■□□□□ 0.08
HMGN1-206ENST00000431390 ING4Q9UNL4 249 aa15.54■□□□□ 0.08
HMGN1-206ENST00000431390 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.53■□□□□ 0.08
HMGN1-206ENST00000431390 CTAG2O75638 210 aa15.53■□□□□ 0.08
HMGN1-206ENST00000431390 TPPPO94811 219 aa15.53■□□□□ 0.08
HMGN1-206ENST00000431390 COX6B1P14854 86 aa15.53■□□□□ 0.08
HMGN1-206ENST00000431390 PITPNBP48739 271 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms