RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 ALKBH4Q9NXW9 302 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 CRIM1Q9NZV1 1036 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 PPP4R1LQ9P1A2 415 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 ZFHX2Q9C0A1 2572 aaPredicted RBP6.27□□□□□ -1.41
COL28A1-202ENST00000430711 A0A0A6YYH2 397 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 LY6G6EA0A0G2JKS1 128 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 A0A1W2PNV4 684 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 A6NJ64 397 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 ZNF98A6NK75 572 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 FIGNL2A6NMB9 653 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.27□□□□□ -1.41
COL28A1-202ENST00000430711 DKK1O94907 266 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 WDPCPO95876 746 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 GLAP06280 429 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 BLVRBP30043 206 aaPredicted RBP6.27□□□□□ -1.41
COL28A1-202ENST00000430711 CD80P33681 288 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 GABREP78334 506 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 C17orf67Q0P5P2 114 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 AIMP2Q13155 320 aaKnown RBP6.27□□□□□ -1.41
COL28A1-202ENST00000430711 NKAIN1Q4KMZ8 207 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 DHRS11Q6UWP2 260 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 OR2M3Q8NG83 312 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 FGFBP3Q8TAT2 258 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 ADAMTS17Q8TE56 1095 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 RNF138Q8WVD3 245 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 SECTM1Q8WVN6 248 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 ST8SIA1Q92185 356 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 ISOC2Q96AB3 205 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 NABP1Q96AH0 204 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 DOCK7Q96N67 2140 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 GNRHR2Q96P88 292 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 SPSB2Q99619 263 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 UQCC2Q9BRT2 126 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 FAAP24Q9BTP7 215 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.27□□□□□ -1.41
COL28A1-202ENST00000430711 RHOFQ9HBH0 211 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 GPR173Q9NS66 373 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 COA4Q9NYJ1 87 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 LPAR3Q9UBY5 353 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 GLS2Q9UI32 602 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 AMDHD2Q9Y303 409 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 U3KQA8 63 aa6.27□□□□□ -1.41
COL28A1-202ENST00000430711 VSTM2BA6NLU5 285 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 MED6O75586 246 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 DIRAS3O95661 229 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 SCGB1D2O95969 90 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 CSTBP04080 98 aaKnown RBP6.26□□□□□ -1.41
COL28A1-202ENST00000430711 SFTA3P0C7M3 94 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 TPT1P13693 172 aaKnown RBP6.26□□□□□ -1.41
COL28A1-202ENST00000430711 APOBEC1P41238 236 aaKnown RBP6.26□□□□□ -1.41
COL28A1-202ENST00000430711 SLC6A9P48067 706 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 COL19A1Q14993 1142 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 VAX1Q5SQQ9 334 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 PRSS54Q6PEW0 395 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 DEGS2Q6QHC5 323 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 UEVLDQ8IX04 471 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 PLPP5Q8NEB5 264 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 OR56B1Q8NGI3 324 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 OR5H2Q8NGV7 314 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 DDIT4LQ96D03 193 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 MVB12AQ96EY5 273 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 PHYHIPLQ96FC7 376 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 IP6K3Q96PC2 410 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 CLCC1Q96S66 551 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 RASL10BQ96S79 203 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 NAA11Q9BSU3 229 aaPredicted RBP6.26□□□□□ -1.41
COL28A1-202ENST00000430711 SCRT1Q9BWW7 348 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 KRTAP9-2Q9BYQ4 174 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 NMES1Q9C002 83 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 METTL8Q9H825 291 aaKnown RBP6.26□□□□□ -1.41
COL28A1-202ENST00000430711 ELL3Q9HB65 397 aaPredicted RBP6.26□□□□□ -1.41
COL28A1-202ENST00000430711 PROK2Q9HC23 129 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 OCIAD1Q9NX40 245 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 RCC2Q9P258 522 aaKnown RBP6.26□□□□□ -1.41
COL28A1-202ENST00000430711 FBXL17Q9UF56 701 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 ZNF107Q9UII5 783 aaPredicted RBP6.26□□□□□ -1.41
COL28A1-202ENST00000430711 WIF1Q9Y5W5 379 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 B3GALT1Q9Y5Z6 326 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 IGKV1-12A0A0C4DH73 117 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 COLCA2A8K830 154 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 CEACAM18A8MTB9 384 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 DUX1O43812 170 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 NME2P1O60361 137 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 IGKV1D-12P01611 117 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 HEXBP07686 556 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 FCGR3AP08637 254 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 FCGR2AP12318 317 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 LYL1P12980 280 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 THBS4P35443 961 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 RBMXP38159 391 aaKnown RBP6.26□□□□□ -1.41
COL28A1-202ENST00000430711 PTGFRP43088 359 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 ZXDAP98168 799 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 HABP2Q14520 560 aaPredicted RBP6.26□□□□□ -1.41
COL28A1-202ENST00000430711 TAF9Q16594 264 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 HIST3H3Q16695 136 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 PIGYQ3MUY2 71 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 TMEM268Q5VZI3 342 aa6.26□□□□□ -1.41
COL28A1-202ENST00000430711 ZNF385CQ66K41 422 aaPredicted RBP6.26□□□□□ -1.41
COL28A1-202ENST00000430711 DHRS7BQ6IAN0 325 aaPredicted RBP6.26□□□□□ -1.41
COL28A1-202ENST00000430711 DNM1P34Q6PK57 102 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms