RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 RNF122Q9H9V4 155 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 TRBV11-1A0A0K0K1C0 115 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 C5orf63A6NC05 138 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 SERPINE3A8MV23 424 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 DEDDO75618 318 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 EIF3GO75821 320 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC00839-202ENST00000429940 PRF1P14222 555 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 PI4KAP42356 2102 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 ZNF84P51523 738 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 HABP2Q14520 560 aaPredicted RBP13.18□□□□□ -0.3
LINC00839-202ENST00000429940 ETV3LQ6ZN32 361 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 SULF2Q8IWU5 870 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 SGPP2Q8IWX5 399 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 C15orf54Q8N8G6 183 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 ADPRHL1Q8NDY3 354 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 NFAM1Q8NET5 270 aaPredicted RBP13.18□□□□□ -0.3
LINC00839-202ENST00000429940 OR6X1Q8NH79 312 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 ZNF501Q96CX3 271 aaPredicted RBP13.18□□□□□ -0.3
LINC00839-202ENST00000429940 SMIM3Q9BZL3 60 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 SLC7A5P2Q9GIP4 190 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 CACFD1Q9UGQ2 172 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 ADAMTS9Q9P2N4 1935 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 ZNF814B7Z6K7 855 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 GAPDHP04406 335 aaKnown RBP13.18□□□□□ -0.3
LINC00839-202ENST00000429940 SNRPEP62304 92 aaKnown RBP13.18□□□□□ -0.3
LINC00839-202ENST00000429940 SLC25A53Q5H9E4 307 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 CRIP3Q6Q6R5 217 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 SEMA6DQ8NFY4 1073 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 LYZL4Q96KX0 146 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 CLCC1Q96S66 551 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 S100A13Q99584 98 aa13.18□□□□□ -0.3
LINC00839-202ENST00000429940 ZNF2Q9BSG1 426 aaPredicted RBP13.18□□□□□ -0.3
LINC00839-202ENST00000429940 ELL3Q9HB65 397 aaPredicted RBP13.18□□□□□ -0.3
LINC00839-202ENST00000429940 LSM5Q9Y4Y9 91 aaKnown RBP13.18□□□□□ -0.3
LINC00839-202ENST00000429940 WDFY3Q8IZQ1 3526 aa13.17□□□□□ -0.3
LINC00839-202ENST00000429940 IGKV1D-8A0A087WSZ0 117 aa13.17□□□□□ -0.3
LINC00839-202ENST00000429940 ZNF726A6NNF4 738 aa13.17□□□□□ -0.3
LINC00839-202ENST00000429940 HEXBP07686 556 aa13.17□□□□□ -0.3
LINC00839-202ENST00000429940 NAT2P11245 290 aa13.17□□□□□ -0.3
LINC00839-202ENST00000429940 MSX1P28360 303 aa13.17□□□□□ -0.3
LINC00839-202ENST00000429940 AKR1C3P42330 323 aa13.17□□□□□ -0.3
LINC00839-202ENST00000429940 ALDH3B1P43353 468 aa13.17□□□□□ -0.3
LINC00839-202ENST00000429940 TMEM33P57088 247 aa13.17□□□□□ -0.3
LINC00839-202ENST00000429940 KCNMB1Q16558 191 aa13.17□□□□□ -0.3
LINC00839-202ENST00000429940 OPN5Q6U736 354 aa13.17□□□□□ -0.3
LINC00839-202ENST00000429940 MAML2Q8IZL2 1156 aaPredicted RBP13.17□□□□□ -0.3
LINC00839-202ENST00000429940 SECTM1Q8WVN6 248 aa13.17□□□□□ -0.3
LINC00839-202ENST00000429940 PRRX2Q99811 253 aa13.17□□□□□ -0.3
LINC00839-202ENST00000429940 TUBD1Q9UJT1 453 aa13.17□□□□□ -0.3
LINC00839-202ENST00000429940 KPTNQ9Y664 436 aa13.17□□□□□ -0.3
LINC00839-202ENST00000429940 RAMP1O60894 148 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 IFNA21P01568 189 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 FCGR2AP12318 317 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 ZNF43P17038 809 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 CPT2P23786 658 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 PTAFRP25105 342 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 PAX6P26367 422 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 ECI1P42126 302 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 PPT1P50897 306 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 TMEM105Q8N8V8 129 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 OR9K2Q8NGE7 335 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 TGIF2Q9GZN2 237 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 PARP12Q9H0J9 701 aaKnown RBP13.16□□□□□ -0.3
LINC00839-202ENST00000429940 METTL7AQ9H8H3 244 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 RPS10P5Q9NQ39 176 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 MCTS1Q9ULC4 181 aaKnown RBP13.16□□□□□ -0.3
LINC00839-202ENST00000429940 AMDHD2Q9Y303 409 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 DHRS7CA6NNS2 312 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 C1orf196B1AJZ1 125 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 SCGB1D2O95969 90 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 THBS4P35443 961 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 FAM3AP98173 230 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 EIF3IQ13347 325 aaKnown RBP13.16□□□□□ -0.3
LINC00839-202ENST00000429940 ARL6IP1Q15041 203 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 UBE2V2Q15819 145 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 HIST3H3Q16695 136 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 FAM69BQ5VUD6 431 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 GGNBP1Q5YKI7 109 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 C6orf201Q7Z4U5 140 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 RNF138Q8WVD3 245 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 OXGR1Q96P68 337 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 TM2D1Q9BX74 207 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 EGLN1Q9GZT9 426 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 ZNF160Q9HCG1 818 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 TIMM10BQ9Y5J6 103 aa13.16□□□□□ -0.3
LINC00839-202ENST00000429940 CRYM-AS1A6NIL9 109 aa13.15□□□□□ -0.3
LINC00839-202ENST00000429940 M0R296 226 aa13.15□□□□□ -0.3
LINC00839-202ENST00000429940 TSPAN15O95858 294 aa13.15□□□□□ -0.3
LINC00839-202ENST00000429940 CTSDP07339 412 aaPredicted RBP13.15□□□□□ -0.3
LINC00839-202ENST00000429940 ACAA1P09110 424 aaPredicted RBP13.15□□□□□ -0.3
LINC00839-202ENST00000429940 MYF5P13349 255 aa13.15□□□□□ -0.3
LINC00839-202ENST00000429940 FAHP16930 419 aa13.15□□□□□ -0.3
LINC00839-202ENST00000429940 GABRR1P24046 479 aa13.15□□□□□ -0.3
LINC00839-202ENST00000429940 SFTPDP35247 375 aa13.15□□□□□ -0.3
LINC00839-202ENST00000429940 HMGN3Q15651 99 aa13.15□□□□□ -0.3
LINC00839-202ENST00000429940 RTL6Q6ICC9 239 aa13.15□□□□□ -0.3
LINC00839-202ENST00000429940 LCN10Q6JVE6 187 aa13.15□□□□□ -0.3
LINC00839-202ENST00000429940 OR10G3Q8NGC4 313 aa13.15□□□□□ -0.3
LINC00839-202ENST00000429940 LYPD6BQ8NI32 183 aa13.15□□□□□ -0.3
LINC00839-202ENST00000429940 MRPL24Q96A35 216 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms