RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ANGPTL5Q86XS5 388 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 YIPF6Q96EC8 236 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 HEYLQ9NQ87 328 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-207ENST00000429896 TAAR3PQ9P1P4 343 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 PIGBOS1A0A0B4J2F0 54 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 UBL7Q96S82 380 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-207ENST00000429896 RBM38Q9H0Z9 239 aaKnown RBP11.41□□□□□ -0.58
PTCH1-207ENST00000429896 RNF212BA8MTL3 300 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 SH2D1BO14796 132 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 IL11P20809 199 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 CXorf67Q86X51 503 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-207ENST00000429896 CMTM2Q8TAZ6 248 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 FAM103A1Q9BTL3 118 aaKnown RBP11.4□□□□□ -0.58
PTCH1-207ENST00000429896 ANAPC1Q9H1A4 1944 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 OR2T2Q6IF00 324 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 PLPPR2Q96GM1 343 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 ZFP57Q9NU63 452 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 C1orf123Q9NWV4 160 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 GPR137BO60478 399 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 CT45A6P0DMU7 189 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 CT45A5P0DMU8 189 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 CT45A7P0DMV0 189 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 ADIRFQ15847 76 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 CT45A1Q5HYN5 189 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 ADGRE4PQ86SQ3 457 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 CT45A3Q8NHU0 189 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 GPR137Q96N19 417 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 MPZL1O95297 269 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 AADACP22760 399 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 RAB11AP62491 216 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 OR8D4Q8NGM9 314 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 FAM57AQ8TBR7 257 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 CMBLQ96DG6 245 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 NMES1Q9C002 83 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 SLA2Q9H6Q3 261 aa11.4□□□□□ -0.58
PTCH1-207ENST00000429896 TOX4O94842 621 aa11.4□□□□□ -0.59
PTCH1-207ENST00000429896 DOC2BQ14184 412 aa11.4□□□□□ -0.59
PTCH1-207ENST00000429896 JAM3Q9BX67 310 aa11.4□□□□□ -0.59
PTCH1-207ENST00000429896 GBF1Q92538 1859 aa11.4□□□□□ -0.59
PTCH1-207ENST00000429896 CLEC2LP0C7M8 214 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 THBS4P35443 961 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 HAAOP46952 286 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 CDK5R1Q15078 307 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 SFXN4Q6P4A7 337 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 BAGE3Q86Y29 109 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 BAGE2Q86Y30 109 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 OR13G1Q8NGZ3 307 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 OR2G2Q8NGZ5 317 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 FAM3DQ96BQ1 224 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 SMIM19Q96E16 107 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 OR2H1Q9GZK4 316 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 PLSCR3Q9NRY6 295 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 RAB22AQ9UL26 194 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 A0A0G2JMM0 328 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 A0A1W2PPB8 328 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 A0A1W2PRS3 328 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 KIR3DP1A8MWS1 328 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 DXOO77932 396 aaKnown RBP11.39□□□□□ -0.59
PTCH1-207ENST00000429896 CELA3AP09093 270 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 GDNFP39905 211 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 ZNF133P52736 654 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-207ENST00000429896 ETFDHQ16134 617 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 UNC13CQ8NB66 2214 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 LOC100289279A0A1B0GTE1 492 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 TSPO2Q5TGU0 170 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 NAA40Q86UY6 237 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 OCEL1Q9H607 264 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 BCO1Q9HAY6 547 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 LIPGQ9Y5X9 500 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 FLVCR1Q9Y5Y0 555 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 ASAH2BP0C7U1 165 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 FUT6P51993 359 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 HFEQ30201 348 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 DEGS2Q6QHC5 323 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 KCTD12Q96CX2 325 aaKnown RBP11.39□□□□□ -0.59
PTCH1-207ENST00000429896 ISG20L2Q9H9L3 353 aaKnown RBP11.39□□□□□ -0.59
PTCH1-207ENST00000429896 ISYNA1Q9NPH2 558 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 CYSLTR2Q9NS75 346 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 RPS16P62249 146 aaKnown RBP11.39□□□□□ -0.59
PTCH1-207ENST00000429896 LYSMD2Q8IV50 215 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 PRSS27Q9BQR3 290 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 SRXN1Q9BYN0 137 aa11.39□□□□□ -0.59
PTCH1-207ENST00000429896 ZNF724A8MTY0 619 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 SPINT2O43291 252 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 OR2J3O76001 311 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 IL3RAP26951 378 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 UBE2G2P60604 165 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 MRGPRGQ86SM5 289 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 HSD17B11Q8NBQ5 300 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 MITD1Q8WV92 249 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 CHST6Q9GZX3 395 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 BTBD17A6NE02 478 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 KRBOX1C9JBD0 128 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 CPEP16870 476 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 CTRB1P17538 263 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 ATF1P18846 271 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 FCER1GP30273 86 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 CTRB2Q6GPI1 263 aa11.38□□□□□ -0.59
PTCH1-207ENST00000429896 TSEN54Q7Z6J9 526 aaKnown RBP11.38□□□□□ -0.59
PTCH1-207ENST00000429896 LRRC28Q86X40 367 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms