RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 TEX36Q5VZQ5 186 aa12.57□□□□□ -0.4
GARNL3-204ENST00000429629 LHFPL2Q6ZUX7 228 aa12.57□□□□□ -0.4
GARNL3-204ENST00000429629 KCTD8Q6ZWB6 473 aa12.57□□□□□ -0.4
GARNL3-204ENST00000429629 CDH26Q8IXH8 852 aa12.57□□□□□ -0.4
GARNL3-204ENST00000429629 SPICQ8N5J4 248 aa12.57□□□□□ -0.4
GARNL3-204ENST00000429629 SCCPDHQ8NBX0 429 aa12.57□□□□□ -0.4
GARNL3-204ENST00000429629 ZNF420Q8TAQ5 688 aaPredicted RBP12.57□□□□□ -0.4
GARNL3-204ENST00000429629 TSEN15Q8WW01 171 aaKnown RBP12.57□□□□□ -0.4
GARNL3-204ENST00000429629 AQP3Q92482 292 aa12.57□□□□□ -0.4
GARNL3-204ENST00000429629 DVL3Q92997 716 aaPredicted RBP12.57□□□□□ -0.4
GARNL3-204ENST00000429629 C12orf43Q96C57 262 aaKnown RBP12.57□□□□□ -0.4
GARNL3-204ENST00000429629 CPNE2Q96FN4 548 aaPredicted RBP12.57□□□□□ -0.4
GARNL3-204ENST00000429629 NR1H4Q96RI1 486 aaPredicted RBP12.57□□□□□ -0.4
GARNL3-204ENST00000429629 RHOFQ9HBH0 211 aa12.57□□□□□ -0.4
GARNL3-204ENST00000429629 TMEM165Q9HC07 324 aa12.57□□□□□ -0.4
GARNL3-204ENST00000429629 UFSP2Q9NUQ7 469 aa12.57□□□□□ -0.4
GARNL3-204ENST00000429629 C1orf123Q9NWV4 160 aa12.57□□□□□ -0.4
GARNL3-204ENST00000429629 RASL12Q9NYN1 266 aa12.57□□□□□ -0.4
GARNL3-204ENST00000429629 FOXJ3Q9UPW0 622 aa12.57□□□□□ -0.4
GARNL3-204ENST00000429629 POLDIP2Q9Y2S7 368 aa12.57□□□□□ -0.4
GARNL3-204ENST00000429629 PPIAL4AQ9Y536 164 aa12.57□□□□□ -0.4
GARNL3-204ENST00000429629 IGHV4-61A0A0C4DH41 118 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 A6NIN4 97 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 A6NLC8 198 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 ZNF879B4DU55 563 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 J3QT63 122 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 LGALS8O00214 317 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 SULT1B1O43704 296 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 SC5DO75845 299 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 GALP22466 123 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 MAP2K4P45985 399 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 ATP1B3P54709 279 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 IL24Q13007 206 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 FAM90A1Q86YD7 464 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 PHC2Q8IXK0 858 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 GCSAMQ8N6F7 178 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 ZFP41Q8N8Y5 198 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 BORCS8Q96FH0 119 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 OPALINQ96PE5 141 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 ZNF696Q9H7X3 374 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 TREM2Q9NZC2 230 aa12.56□□□□□ -0.4
GARNL3-204ENST00000429629 A0A087WXM4 84 aa12.55□□□□□ -0.4
GARNL3-204ENST00000429629 TRAV38-1A0A0B4J264 116 aa12.55□□□□□ -0.4
GARNL3-204ENST00000429629 SRRM5B3KS81 715 aa12.55□□□□□ -0.4
GARNL3-204ENST00000429629 TNFRSF13BO14836 293 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-204ENST00000429629 CYB5R3P00387 301 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-204ENST00000429629 INHBBP09529 407 aa12.55□□□□□ -0.4
GARNL3-204ENST00000429629 IGFBP3P17936 291 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-204ENST00000429629 FSTP19883 344 aa12.55□□□□□ -0.4
GARNL3-204ENST00000429629 RAB3AP20336 220 aa12.55□□□□□ -0.4
GARNL3-204ENST00000429629 AZGP1P25311 298 aaKnown RBP12.55□□□□□ -0.4
GARNL3-204ENST00000429629 HAAOP46952 286 aa12.55□□□□□ -0.4
GARNL3-204ENST00000429629 MTCP1P56278 107 aa12.55□□□□□ -0.4
GARNL3-204ENST00000429629 LMO4P61968 165 aa12.55□□□□□ -0.4
GARNL3-204ENST00000429629 ZMYND11Q15326 602 aa12.55□□□□□ -0.4
GARNL3-204ENST00000429629 C11orf91Q3C1V1 193 aa12.55□□□□□ -0.4
GARNL3-204ENST00000429629 ZSCAN4Q8NAM6 433 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-204ENST00000429629 RPL3LQ92901 407 aaKnown RBP12.55□□□□□ -0.4
GARNL3-204ENST00000429629 DERL3Q96Q80 235 aa12.55□□□□□ -0.4
GARNL3-204ENST00000429629 SEBOXQ9HB31 216 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-204ENST00000429629 TMEM138Q9NPI0 162 aa12.55□□□□□ -0.4
GARNL3-204ENST00000429629 DCAF16Q9NXF7 216 aa12.55□□□□□ -0.4
GARNL3-204ENST00000429629 CKLFQ9UBR5 152 aa12.55□□□□□ -0.4
GARNL3-204ENST00000429629 SF3B6Q9Y3B4 125 aaKnown RBP12.55□□□□□ -0.4
GARNL3-204ENST00000429629 HIVEP1P15822 2718 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 VPS13CQ709C8 3753 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 IGHV3-64DA0A0J9YX35 117 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 MEGF11A6BM72 1044 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 OOEPA6NGQ2 149 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 TRIM64CA6NLI5 447 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 H3BSH0 61 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 MAGEB3O15480 346 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 HSMCR30P0CW71 290 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 GABRA5P31644 462 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 TGFBR2P37173 567 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 SOX2P48431 317 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 GZMKP49863 264 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 ERVK11-1P61568 191 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 ZNF404Q494X3 552 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 ACSM3Q53FZ2 586 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 ARMCX4Q5H9R4 360 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 SYT6Q5T7P8 510 aaPredicted RBP12.54□□□□□ -0.4
GARNL3-204ENST00000429629 ATPAF1Q5TC12 328 aaPredicted RBP12.54□□□□□ -0.4
GARNL3-204ENST00000429629 LIPKQ5VXJ0 399 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 HAGHLQ6PII5 290 aaPredicted RBP12.54□□□□□ -0.4
GARNL3-204ENST00000429629 DCDC5Q6ZRR9 648 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 ZNF826PQ6ZT77 177 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 BIVMQ86UB2 503 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 MKXQ8IYA7 352 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 SAXO1Q8IYX7 474 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 CIARTQ8N365 385 aaPredicted RBP12.54□□□□□ -0.4
GARNL3-204ENST00000429629 POC1AQ8NBT0 407 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 TSPAN14Q8NG11 270 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 LRRC29Q8WV35 223 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 RAB39BQ96DA2 213 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 DNTTIP1Q9H147 329 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 KAAG1Q9UBP8 84 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 MIOXQ9UGB7 285 aa12.54□□□□□ -0.4
GARNL3-204ENST00000429629 IGKV1-27A0A075B6S5 117 aa12.53□□□□□ -0.4
GARNL3-204ENST00000429629 FAM230AA0A1W2PPH8 454 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms