RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 OR5H2Q8NGV7 314 aa12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 ST8SIA4Q92187 359 aa12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 Q96M66 194 aa12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 ST6GALNAC5Q9BVH7 336 aa12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 ZNF552Q9H707 407 aaPredicted RBP12.15□□□□□ -0.46
APOBEC3D-202ENST00000427494 FREM1Q5H8C1 2179 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 TRGV5A0A0B4J1U4 118 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 ZNF816-ZNF321PA0A0X1KG74 233 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 SERPINE3A8MV23 424 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 L7N2F9 121 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 CSTBP04080 98 aaKnown RBP12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 CD79AP11912 226 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 C4BPBP20851 252 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 CCNOP22674 350 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 NFYAP23511 347 aaPredicted RBP12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 ZBTB25P24278 435 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 SOX8P57073 446 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 ARL6IP1Q15041 203 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 NKAPLQ5M9Q1 402 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 PLCXD3Q63HM9 321 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 HOGA1Q86XE5 327 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 ADAD2Q8NCV1 583 aaKnown RBP12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 CSNK2A3Q8NEV1 391 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 MARCH1Q8TCQ1 289 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 ASB13Q8WXK3 278 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 PIGCQ92535 297 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 FN3KRPQ9HA64 309 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 ASCL3Q9NQ33 180 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 SPRR3Q9UBC9 169 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 ZNF230Q9UIE0 474 aaPredicted RBP12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 SLC7A11Q9UPY5 501 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 ARHGAP21Q5T5U3 1957 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 DNAJC13O75165 2243 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 FXYD6-FXYD2A0A087WZ82 144 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 M0R233 179 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 ZNHIT1O43257 154 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 SEC61A1P61619 476 aaKnown RBP12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 OPCMLQ14982 345 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 LY6G6FQ5SQ64 297 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 C6orf201Q7Z4U5 140 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 ARRDC1Q8N5I2 433 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 NAXEQ8NCW5 288 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 MAFIPQ8WZ33 124 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 SPSB4Q96A44 273 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 WDYHV1Q96HA8 205 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 FXYD6Q9H0Q3 95 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 C12orf49Q9H741 205 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 KCNN3Q9UGI6 736 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 CSAG2Q9Y5P2 127 aa12.14□□□□□ -0.47
APOBEC3D-202ENST00000427494 C9orf170A2RU37 121 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 C5orf49A4QMS7 147 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 ANKRD34BA5PLL1 514 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 ZNF503-AS2A6NEH8 195 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 LRP3O75074 770 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 IL2RAP01589 272 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 SERPINA5P05154 406 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 CCL2P13500 99 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 AKR1C4P17516 323 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 CCL11P51671 97 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 FUT6P51993 359 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 ATP1B3P54709 279 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 SNU13P55769 128 aaKnown RBP12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 PMP22Q01453 160 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 RTL6Q6ICC9 239 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 FAHD2BQ6P2I3 314 aaPredicted RBP12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 COLCA1Q6ZS62 124 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 OR8H3Q8N146 312 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 TERB2Q8NHR7 220 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 FAHD2AQ96GK7 314 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 ZNF701Q9NV72 531 aaPredicted RBP12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 PLEKHJ1Q9NW61 149 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 PRSS50Q9UI38 385 aa12.13□□□□□ -0.47
APOBEC3D-202ENST00000427494 MCRIP1C9JLW8 97 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 ARPC5O15511 151 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 SNAPC5O75971 98 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 IFNA7P01567 189 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 VAMP1P23763 118 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 OR3A3P47888 321 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 OR3A2P47893 321 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 NPY4RP50391 375 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 TNFSF10P50591 281 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 TAS2R46P59540 309 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 IL13RA1P78552 427 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 CAMK2BQ13554 666 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 EXOSC2Q13868 293 aaKnown RBP12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 PPA1Q15181 289 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 LIN54Q6MZP7 749 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 OR5M8Q8NGP6 311 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 CASTOR1Q8WTX7 329 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 ZDHHC11Q9H8X9 412 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 SLC22A20A6NK97 555 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 HMSDA8MTL9 139 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 CCSO14618 274 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 EFSO43281 561 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 NOS1APO75052 506 aaPredicted RBP12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 CA11O75493 328 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 COX5BP10606 129 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 PPP3CBP16298 524 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 ARR3P36575 388 aa12.12□□□□□ -0.47
APOBEC3D-202ENST00000427494 TAS2R31P59538 309 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms