RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 OCLNQ16625 522 aa15.14■□□□□ 0.01
SMARCAL1-205ENST00000425815 BRD3OSQ6XYD6 125 aa15.14■□□□□ 0.01
SMARCAL1-205ENST00000425815 PRSS35Q8N3Z0 413 aa15.14■□□□□ 0.01
SMARCAL1-205ENST00000425815 RFKQ969G6 155 aa15.14■□□□□ 0.01
SMARCAL1-205ENST00000425815 WDFY2Q96P53 400 aa15.14■□□□□ 0.01
SMARCAL1-205ENST00000425815 GAFA1Q96PS6 74 aa15.14■□□□□ 0.01
SMARCAL1-205ENST00000425815 PCGF1Q9BSM1 259 aa15.14■□□□□ 0.01
SMARCAL1-205ENST00000425815 PRDM13Q9H4Q3 707 aa15.14■□□□□ 0.01
SMARCAL1-205ENST00000425815 CNTD2Q9H8S5 307 aa15.14■□□□□ 0.01
SMARCAL1-205ENST00000425815 GPR173Q9NS66 373 aa15.14■□□□□ 0.01
SMARCAL1-205ENST00000425815 CENPVL3A0A0U1RRI6 287 aa15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 DNAJC9-AS1A6NH13 148 aa15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 OR5B21A6NL26 309 aa15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 DLGAP1O14490 977 aa15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 TOX4O94842 621 aa15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 IKZF1Q13422 519 aa15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 DGUOKQ16854 277 aa15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 ODF4Q2M2E3 257 aa15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 CLVS2Q5SYC1 327 aa15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 PLCXD3Q63HM9 321 aa15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 RUSC1-AS1Q66K80 236 aa15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 HAGHLQ6PII5 290 aaPredicted RBP15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 SLC36A1Q7Z2H8 476 aa15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 PNLDC1Q8NA58 520 aaKnown RBP15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 DNTTIP1Q9H147 329 aa15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 NLKQ9UBE8 527 aa15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 DNAJB11Q9UBS4 358 aa15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 ZNF222Q9UK12 451 aa15.13■□□□□ 0.01
SMARCAL1-205ENST00000425815 TENM1Q9UKZ4 2725 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 IGKV1D-17A0A075B6S4 117 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 PQLC2LA1A4F0 135 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 NDUFB3O43676 98 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 SYNGR1O43759 233 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 ACAA1P09110 424 aaPredicted RBP15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 PSG2P11465 335 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 GLRA1P23415 457 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 PRTN3P24158 256 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 ATP6V1E1P36543 226 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 MTNR1AP48039 350 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 BAMBIQ13145 260 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 SLC9A3R2Q15599 337 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 DEFB112Q30KQ8 113 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 RBMS3Q6XE24 437 aaKnown RBP15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 C10orf67Q8IYJ2 551 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 RDH10Q8IZV5 341 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 ZNF671Q8TAW3 534 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 RNFT2Q96EX2 444 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 ZNF488Q96MN9 340 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 IMPAD1Q9NX62 359 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 MAB21L2Q9Y586 359 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 ORC6Q9Y5N6 252 aa15.12■□□□□ 0.01
SMARCAL1-205ENST00000425815 OR2AT4A6NND4 320 aa15.11■□□□□ 0.01
SMARCAL1-205ENST00000425815 DHRS7CA6NNS2 312 aa15.11■□□□□ 0.01
SMARCAL1-205ENST00000425815 H3BSH0 61 aa15.11■□□□□ 0.01
SMARCAL1-205ENST00000425815 SIGLEC5O15389 551 aa15.11■□□□□ 0.01
SMARCAL1-205ENST00000425815 KIR3DL2P43630 455 aa15.11■□□□□ 0.01
SMARCAL1-205ENST00000425815 ACTG1P63261 375 aa15.11■□□□□ 0.01
SMARCAL1-205ENST00000425815 TP53I3Q53FA7 332 aa15.11■□□□□ 0.01
SMARCAL1-205ENST00000425815 C12orf54Q6X4T0 127 aa15.11■□□□□ 0.01
SMARCAL1-205ENST00000425815 PQLC1Q8N2U9 271 aa15.11■□□□□ 0.01
SMARCAL1-205ENST00000425815 GCDHQ92947 438 aaPredicted RBP15.11■□□□□ 0.01
SMARCAL1-205ENST00000425815 DCTN5Q9BTE1 182 aa15.11■□□□□ 0.01
SMARCAL1-205ENST00000425815 C9orf16Q9BUW7 83 aa15.11■□□□□ 0.01
SMARCAL1-205ENST00000425815 ACOXLQ9NUZ1 547 aa15.11■□□□□ 0.01
SMARCAL1-205ENST00000425815 EXOGQ9Y2C4 368 aaKnown RBP15.11■□□□□ 0.01
SMARCAL1-205ENST00000425815 CLDN34H7C241 214 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 GPR37O15354 613 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 CFPP27918 469 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 HAAOP46952 286 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 BPIFB3P59826 476 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 UBE2V2Q15819 145 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 CDONQ4KMG0 1287 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 LRRC10Q5BKY1 277 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 GPR157Q5UAW9 335 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 METTL11BQ5VVY1 283 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 MEDAGQ5VYS4 303 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 ACP7Q6ZNF0 438 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 ZBTB49Q6ZSB9 765 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 ENTHD1Q8IYW4 607 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 Q8N7P7 452 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 POC1AQ8NBT0 407 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 RHOXF1Q8NHV9 184 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 C8orf46Q8TAG6 207 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 TMIGD2Q96BF3 282 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 MED30Q96HR3 178 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 RASL12Q9NYN1 266 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 GNG8Q9UK08 70 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 GMPPBQ9Y5P6 360 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 KPTNQ9Y664 436 aa15.1■□□□□ 0.01
SMARCAL1-205ENST00000425815 SYT7O43581 403 aa15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 NOS1APO75052 506 aaPredicted RBP15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 PGA5P0DJD9 388 aa15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 GABRA2P47869 451 aa15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 OR12D2P58182 307 aa15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 ANGPTL5Q86XS5 388 aa15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 ZNF573Q86YE8 665 aa15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 CALHM1Q8IU99 346 aa15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 CD177Q8N6Q3 437 aa15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 ZNRF1Q8ND25 227 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms