RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ZNF319Q9P2F9 582 aa13.46□□□□□ -0.25
SHOX2-202ENST00000425436 CGGBP1Q9UFW8 167 aaPredicted RBP13.46□□□□□ -0.25
SHOX2-202ENST00000425436 FLNBO75369 2602 aaKnown RBP13.46□□□□□ -0.26
SHOX2-202ENST00000425436 A0A1W2PPR1 153 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 ANKRD20A5PA0PJZ0 165 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 FAM221AA4D161 298 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 BOLA2-SMG1P6H3BVE0 249 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 ABCD4O14678 606 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 LMX1BO60663 402 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 IGKV3-15P01624 115 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 CSF1P09603 554 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 CECR9P0C854 216 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 COX5BP10606 129 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 CD40P25942 277 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 ARR3P36575 388 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 SRP9P49458 86 aaKnown RBP13.45□□□□□ -0.26
SHOX2-202ENST00000425436 RAB25P57735 213 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 PSG4Q00888 419 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 TATDN3Q17R31 274 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 TMEM53Q6P2H8 277 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 TMEM108Q6UXF1 575 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 SSX8Q7RTT4 187 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 OR2W3Q7Z3T1 314 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 TMEM200AQ86VY9 491 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 ZNF584Q8IVC4 421 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 OR52N4Q8NGI2 321 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 OR13C9Q8NGT0 318 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 AKR7LQ8NHP1 331 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 CPNE2Q96FN4 548 aaPredicted RBP13.45□□□□□ -0.26
SHOX2-202ENST00000425436 CACNG6Q9BXT2 260 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 ZNF107Q9UII5 783 aaPredicted RBP13.45□□□□□ -0.26
SHOX2-202ENST00000425436 CACNA1DQ01668 2161 aa13.45□□□□□ -0.26
SHOX2-202ENST00000425436 TRAV18A0A075B6X5 111 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 H7C417 338 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 IGLV1-44P01699 117 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 TCRBP04435 133 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 CD3EP07766 207 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 CHRM2P08172 466 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 CCL2P13500 99 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 ZNF14P17017 642 aaPredicted RBP13.44□□□□□ -0.26
SHOX2-202ENST00000425436 EIF2B2P49770 351 aaKnown RBP13.44□□□□□ -0.26
SHOX2-202ENST00000425436 KRTAP10-9P60411 292 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 PABPC1L2AQ5JQF8 200 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 ADAM5Q6NVV9 412 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 PNLDC1Q8NA58 520 aaKnown RBP13.44□□□□□ -0.26
SHOX2-202ENST00000425436 CPEB3Q8NE35 698 aaKnown RBP13.44□□□□□ -0.26
SHOX2-202ENST00000425436 FAM46BQ96A09 425 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 C14orf79Q96F83 325 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 MTFP1Q9UDX5 166 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 RHBDD3Q9Y3P4 386 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 ROS1P08922 2347 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 PTAFRP25105 342 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 HTR5AP47898 357 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 EFNB2P52799 333 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 ACTBP60709 375 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 ACTG1P63261 375 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 C1QTNF12Q5T7M4 302 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 OLFML2AQ68BL7 652 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 ZNF774Q6NX45 483 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 BTN2A1Q7KYR7 527 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 ANGPTL5Q86XS5 388 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 FAM169BQ8N8A8 192 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 OR4D6Q8NGJ1 314 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 KCNG3Q8TAE7 436 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 NEUROG1Q92886 237 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 UPRTQ96BW1 309 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 RADILQ96JH8 1075 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 WNT5BQ9H1J7 359 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 CLEC4MQ9H2X3 399 aaPredicted RBP13.44□□□□□ -0.26
SHOX2-202ENST00000425436 AUNIPQ9H7T9 357 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 HRASLSQ9HDD0 168 aa13.44□□□□□ -0.26
SHOX2-202ENST00000425436 SERPINA5P05154 406 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 HCKP08631 526 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 GIFP27352 417 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 SSTR2P30874 369 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 CALCRP30988 508 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 BTCP35070 178 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 NAAAQ02083 359 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 PLP2Q04941 152 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 RIPPLY1Q0D2K3 151 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 GFOD2Q3B7J2 385 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 SLC22A25Q6T423 547 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 OR5AS1Q8N127 324 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 SEMA6DQ8NFY4 1073 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 OR56B4Q8NH76 319 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 UBASH3BQ8TF42 649 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 AKAP1Q92667 903 aaKnown RBP eCLIP13.43□□□□□ -0.26
SHOX2-202ENST00000425436 SGK3Q96BR1 496 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 LYZL4Q96KX0 146 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 CHST5Q9GZS9 411 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 KLK11Q9UBX7 282 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 ZNF221Q9UK13 617 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 RNF115Q9Y4L5 304 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 APCP25054 2843 aa13.43□□□□□ -0.26
SHOX2-202ENST00000425436 UNC79Q9P2D8 2635 aa13.42□□□□□ -0.26
SHOX2-202ENST00000425436 ATP6V1G2-DDX39BF2Z307 99 aa13.42□□□□□ -0.26
SHOX2-202ENST00000425436 XRCC2O43543 280 aa13.42□□□□□ -0.26
SHOX2-202ENST00000425436 LCATP04180 440 aa13.42□□□□□ -0.26
SHOX2-202ENST00000425436 LPLP06858 475 aa13.42□□□□□ -0.26
SHOX2-202ENST00000425436 CCNOP22674 350 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms