RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 OR6M1Q8NGM8 313 aa8.59□□□□□ -1.03
CD44-207ENST00000425428 TNFAIP8L1Q8WVP5 186 aa8.59□□□□□ -1.03
CD44-207ENST00000425428 PHF21AQ96BD5 680 aa8.59□□□□□ -1.03
CD44-207ENST00000425428 MEGF10Q96KG7 1140 aa8.59□□□□□ -1.03
CD44-207ENST00000425428 CST11Q9H112 138 aa8.59□□□□□ -1.03
CD44-207ENST00000425428 PLEKHF2Q9H8W4 249 aa8.59□□□□□ -1.03
CD44-207ENST00000425428 RHOFQ9HBH0 211 aa8.59□□□□□ -1.03
CD44-207ENST00000425428 MYOZ1Q9NP98 299 aaPredicted RBP8.59□□□□□ -1.03
CD44-207ENST00000425428 DLL4Q9NR61 685 aa8.59□□□□□ -1.03
CD44-207ENST00000425428 ING4Q9UNL4 249 aa8.59□□□□□ -1.03
CD44-207ENST00000425428 CEPT1Q9Y6K0 416 aa8.59□□□□□ -1.03
CD44-207ENST00000425428 DYSFO75923 2080 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 PQLC2LA1A4F0 135 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 H3BUI4 141 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 H7C417 338 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 J3QT63 122 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 PIN1P1O15428 100 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 MLNRO43193 412 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 LILRA1O75019 489 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 KDM4BO94953 1096 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 PLATP00750 562 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 SOD3P08294 240 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 CTF1Q16619 201 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 DGUOKQ16854 277 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 MSMPQ1L6U9 139 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 MST1LQ2TV78 715 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 ZNF529Q6P280 563 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 ZNF295-AS1Q8N0V1 137 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 ZSCAN4Q8NAM6 433 aaPredicted RBP8.58□□□□□ -1.04
CD44-207ENST00000425428 OR52N4Q8NGI2 321 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 OR51F2Q8NH61 342 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 ITLN1Q8WWA0 313 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 DVL3Q92997 716 aaPredicted RBP8.58□□□□□ -1.04
CD44-207ENST00000425428 C12orf43Q96C57 262 aaKnown RBP8.58□□□□□ -1.04
CD44-207ENST00000425428 TIMD4Q96H15 378 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 PKIBQ9C010 78 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 METTL9Q9H1A3 318 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 SMURF1Q9HCE7 757 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 UFSP2Q9NUQ7 469 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 MRPS28Q9Y2Q9 187 aaKnown RBP8.58□□□□□ -1.04
CD44-207ENST00000425428 CHD3Q12873 2000 aaKnown RBP8.58□□□□□ -1.04
CD44-207ENST00000425428 IGHV1-69-2A0A0G2JMI3 117 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 A0A1B0GWJ7 208 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 H0YL77 283 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 H3BMQ9 156 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 ARSBP15848 533 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 THBS2P35442 1172 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 PTGFRP43088 359 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 GATA4P43694 442 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 KCNJ8Q15842 424 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 IDNKQ5T6J7 187 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 Q6ZR03 302 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 SLC16A12Q6ZSM3 486 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 ANGPTL5Q86XS5 388 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 SAXO1Q8IYX7 474 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 OR51A2Q8NGJ7 313 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 ACOT12Q8WYK0 555 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 RDH5Q92781 318 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 RFT1Q96AA3 541 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 ORAI1Q96D31 301 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 NAA50Q9GZZ1 169 aaKnown RBP8.58□□□□□ -1.04
CD44-207ENST00000425428 C1orf123Q9NWV4 160 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 DNAJB11Q9UBS4 358 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 STEAP1Q9UHE8 339 aa8.58□□□□□ -1.04
CD44-207ENST00000425428 RAI1Q7Z5J4 1906 aaPredicted RBP8.57□□□□□ -1.04
CD44-207ENST00000425428 CACNA1DQ01668 2161 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 GCN1Q92616 2671 aaKnown RBP8.57□□□□□ -1.04
CD44-207ENST00000425428 IGKV1-9A0A0C4DH69 117 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 AIPO00170 330 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 SLC17A2O00624 439 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 NXPH2O95156 264 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 BPNT1O95861 308 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 CDKN1AP38936 164 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 EFNA4P52798 201 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 IL24Q13007 206 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 ZNF154Q13106 437 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 PDZK1IP1Q13113 114 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 HNRNPA0Q13151 305 aaKnown RBP8.57□□□□□ -1.04
CD44-207ENST00000425428 CARTPTQ16568 116 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 C11orf71Q6IPW1 123 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 SFXN4Q6P4A7 337 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 SLC25A26Q70HW3 274 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 LRRTM1Q86UE6 522 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 MOGAT3Q86VF5 341 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 SCCPDHQ8NBX0 429 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 OR5D18Q8NGL1 313 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 OR10Z1Q8NGY1 313 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 HPSE2Q8WWQ2 592 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 CCL17Q92583 94 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 SLC25A46Q96AG3 418 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 KCTD12Q96CX2 325 aaKnown RBP8.57□□□□□ -1.04
CD44-207ENST00000425428 SPACA5Q96QH8 159 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 OR51I2Q9H344 312 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 RASL12Q9NYN1 266 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 RNF7Q9UBF6 113 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 DAPK2Q9UIK4 370 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 ADAM30Q9UKF2 790 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 NPTNQ9Y639 398 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 COL12A1Q99715 3063 aa8.57□□□□□ -1.04
CD44-207ENST00000425428 METTL21EPA6NDL7 271 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms