RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 BEX1Q9HBH7 125 aa22.84■■□□□ 1.25
LDB1-202ENST00000425280 RANGRFQ9HD47 186 aaPredicted RBP22.84■■□□□ 1.25
LDB1-202ENST00000425280 DMXL2Q8TDJ6 3036 aa22.84■■□□□ 1.25
LDB1-202ENST00000425280 ZNF736B4DX44 427 aaPredicted RBP22.83■■□□□ 1.25
LDB1-202ENST00000425280 MFNGO00587 321 aa22.83■■□□□ 1.25
LDB1-202ENST00000425280 ICMTO60725 284 aa22.83■■□□□ 1.25
LDB1-202ENST00000425280 RAB3DO95716 219 aa22.83■■□□□ 1.25
LDB1-202ENST00000425280 CST4P01036 141 aa22.83■■□□□ 1.25
LDB1-202ENST00000425280 CD74P04233 296 aa22.83■■□□□ 1.25
LDB1-202ENST00000425280 PRDX4Q13162 271 aa22.83■■□□□ 1.25
LDB1-202ENST00000425280 RSU1Q15404 277 aa22.83■■□□□ 1.25
LDB1-202ENST00000425280 CSNK2A3Q8NEV1 391 aa22.83■■□□□ 1.25
LDB1-202ENST00000425280 M0QYG6 137 aa22.83■■□□□ 1.24
LDB1-202ENST00000425280 PTGER4P35408 488 aa22.83■■□□□ 1.24
LDB1-202ENST00000425280 GNG2P59768 71 aa22.83■■□□□ 1.24
LDB1-202ENST00000425280 CD83Q01151 205 aa22.83■■□□□ 1.24
LDB1-202ENST00000425280 RPRMLQ8N4K4 120 aa22.83■■□□□ 1.24
LDB1-202ENST00000425280 WDR31Q8NA23 367 aa22.83■■□□□ 1.24
LDB1-202ENST00000425280 OR4S1Q8NGB4 309 aa22.83■■□□□ 1.24
LDB1-202ENST00000425280 OR5L1Q8NGL2 311 aa22.83■■□□□ 1.24
LDB1-202ENST00000425280 TINAGL1Q9GZM7 467 aaPredicted RBP22.83■■□□□ 1.24
LDB1-202ENST00000425280 POU2F3Q9UKI9 436 aa22.83■■□□□ 1.24
LDB1-202ENST00000425280 FIGNL2A6NMB9 653 aa22.82■■□□□ 1.24
LDB1-202ENST00000425280 HTR3BO95264 441 aa22.82■■□□□ 1.24
LDB1-202ENST00000425280 CPT2P23786 658 aa22.82■■□□□ 1.24
LDB1-202ENST00000425280 PDZK1IP1Q13113 114 aa22.82■■□□□ 1.24
LDB1-202ENST00000425280 RBMS2Q15434 407 aaKnown RBP22.82■■□□□ 1.24
LDB1-202ENST00000425280 CXorf67Q86X51 503 aaPredicted RBP22.82■■□□□ 1.24
LDB1-202ENST00000425280 Q96M66 194 aa22.82■■□□□ 1.24
LDB1-202ENST00000425280 OR51J1Q9H342 316 aa22.82■■□□□ 1.24
LDB1-202ENST00000425280 ZNF71Q9NQZ8 489 aaPredicted RBP22.82■■□□□ 1.24
LDB1-202ENST00000425280 INTS1Q8N201 2190 aaKnown RBP22.82■■□□□ 1.24
LDB1-202ENST00000425280 IGKV1-12A0A0C4DH73 117 aa22.81■■□□□ 1.24
LDB1-202ENST00000425280 CD300LBA8K4G0 201 aa22.81■■□□□ 1.24
LDB1-202ENST00000425280 IGKV1D-12P01611 117 aa22.81■■□□□ 1.24
LDB1-202ENST00000425280 CRHP06850 196 aa22.81■■□□□ 1.24
LDB1-202ENST00000425280 BLVRBP30043 206 aaPredicted RBP22.81■■□□□ 1.24
LDB1-202ENST00000425280 CBX3Q13185 183 aa22.81■■□□□ 1.24
LDB1-202ENST00000425280 ST3GAL2Q16842 350 aa22.81■■□□□ 1.24
LDB1-202ENST00000425280 PNLIPRP3Q17RR3 467 aa22.81■■□□□ 1.24
LDB1-202ENST00000425280 Q8NA96 180 aa22.81■■□□□ 1.24
LDB1-202ENST00000425280 NAXEQ8NCW5 288 aa22.81■■□□□ 1.24
LDB1-202ENST00000425280 BEST4Q8NFU0 473 aa22.81■■□□□ 1.24
LDB1-202ENST00000425280 FAM57AQ8TBR7 257 aa22.81■■□□□ 1.24
LDB1-202ENST00000425280 FYTTD1Q96QD9 318 aaKnown RBP22.81■■□□□ 1.24
LDB1-202ENST00000425280 FGF23Q9GZV9 251 aaPredicted RBP22.81■■□□□ 1.24
LDB1-202ENST00000425280 PXT1Q8NFP0 134 aa22.81■■□□□ 1.24
LDB1-202ENST00000425280 DMRTB1Q96MA1 342 aa22.81■■□□□ 1.24
LDB1-202ENST00000425280 GINS4Q9BRT9 223 aa22.81■■□□□ 1.24
LDB1-202ENST00000425280 MED28Q9H204 178 aa22.81■■□□□ 1.24
LDB1-202ENST00000425280 IFT46Q9NQC8 304 aa22.81■■□□□ 1.24
LDB1-202ENST00000425280 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP22.81■■□□□ 1.24
LDB1-202ENST00000425280 ZNF629Q9UEG4 869 aaPredicted RBP22.81■■□□□ 1.24
LDB1-202ENST00000425280 PQLC2LA1A4F0 135 aa22.8■■□□□ 1.24
LDB1-202ENST00000425280 CSTBP04080 98 aaKnown RBP22.8■■□□□ 1.24
LDB1-202ENST00000425280 CBR1P16152 277 aa22.8■■□□□ 1.24
LDB1-202ENST00000425280 HOXC12P31275 282 aa22.8■■□□□ 1.24
LDB1-202ENST00000425280 ZDHHC23Q8IYP9 409 aa22.8■■□□□ 1.24
LDB1-202ENST00000425280 HPSE2Q8WWQ2 592 aa22.8■■□□□ 1.24
LDB1-202ENST00000425280 PECRQ9BY49 303 aa22.8■■□□□ 1.24
LDB1-202ENST00000425280 CDH20Q9HBT6 801 aa22.8■■□□□ 1.24
LDB1-202ENST00000425280 NPDC1Q9NQX5 325 aaPredicted RBP22.8■■□□□ 1.24
LDB1-202ENST00000425280 J3QW42 95 aa22.8■■□□□ 1.24
LDB1-202ENST00000425280 ZNF735P0CB33 412 aa22.8■■□□□ 1.24
LDB1-202ENST00000425280 NKX2-5P52952 324 aaPredicted RBP22.8■■□□□ 1.24
LDB1-202ENST00000425280 MRPL49Q13405 166 aaKnown RBP22.8■■□□□ 1.24
LDB1-202ENST00000425280 OR52W1Q6IF63 320 aa22.8■■□□□ 1.24
LDB1-202ENST00000425280 CALHM1Q8IU99 346 aa22.8■■□□□ 1.24
LDB1-202ENST00000425280 FTMTQ8N4E7 242 aa22.8■■□□□ 1.24
LDB1-202ENST00000425280 IL36GQ9NZH8 169 aa22.8■■□□□ 1.24
LDB1-202ENST00000425280 PYCARD-AS1I3L0S3 204 aa22.79■■□□□ 1.24
LDB1-202ENST00000425280 PRAF2O60831 178 aa22.79■■□□□ 1.24
LDB1-202ENST00000425280 ZNF780AO75290 641 aaPredicted RBP22.79■■□□□ 1.24
LDB1-202ENST00000425280 RAD52P43351 418 aa22.79■■□□□ 1.24
LDB1-202ENST00000425280 FCN2Q15485 313 aa22.79■■□□□ 1.24
LDB1-202ENST00000425280 CEACAM21Q3KPI0 293 aa22.79■■□□□ 1.24
LDB1-202ENST00000425280 SPATA46Q5T0L3 261 aa22.79■■□□□ 1.24
LDB1-202ENST00000425280 C3P1Q6ZMU1 363 aa22.79■■□□□ 1.24
LDB1-202ENST00000425280 BHLHE23Q8NDY6 225 aa22.79■■□□□ 1.24
LDB1-202ENST00000425280 EIF3KQ9UBQ5 218 aaKnown RBP22.79■■□□□ 1.24
LDB1-202ENST00000425280 ANAPC10Q9UM13 185 aa22.79■■□□□ 1.24
LDB1-202ENST00000425280 A0A1B0GUH1 482 aa22.78■■□□□ 1.24
LDB1-202ENST00000425280 SMPD2O60906 423 aa22.78■■□□□ 1.24
LDB1-202ENST00000425280 AGFG2O95081 481 aa22.78■■□□□ 1.24
LDB1-202ENST00000425280 IL2RAP01589 272 aa22.78■■□□□ 1.24
LDB1-202ENST00000425280 AMY2AP04746 511 aa22.78■■□□□ 1.24
LDB1-202ENST00000425280 ANXA7P20073 488 aaKnown RBP22.78■■□□□ 1.24
LDB1-202ENST00000425280 IL32P24001 234 aa22.78■■□□□ 1.24
LDB1-202ENST00000425280 GABRR1P24046 479 aa22.78■■□□□ 1.24
LDB1-202ENST00000425280 MECP2P51608 486 aaKnown RBP22.78■■□□□ 1.24
LDB1-202ENST00000425280 TDGF1P3P51864 188 aa22.78■■□□□ 1.24
LDB1-202ENST00000425280 P2RY6Q15077 328 aa22.78■■□□□ 1.24
LDB1-202ENST00000425280 EIF2S3LQ2VIR3 472 aaKnown RBP22.78■■□□□ 1.24
LDB1-202ENST00000425280 CISD2Q8N5K1 135 aaKnown RBP22.78■■□□□ 1.24
LDB1-202ENST00000425280 DACT3Q96B18 629 aaPredicted RBP22.78■■□□□ 1.24
LDB1-202ENST00000425280 C1QTNF6Q9BXI9 259 aa22.78■■□□□ 1.24
LDB1-202ENST00000425280 LILRA1O75019 489 aa22.78■■□□□ 1.24
LDB1-202ENST00000425280 IGKV3-15P01624 115 aa22.78■■□□□ 1.24
LDB1-202ENST00000425280 HPXP02790 462 aa22.78■■□□□ 1.24
LDB1-202ENST00000425280 TIMP3P35625 211 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms