RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 ACSM4P0C7M7 580 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 SPI1P17947 270 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 PRKACGP22612 351 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 CFL1P23528 166 aaKnown RBP4.72□□□□□ -1.65
LINC00458-201ENST00000423442 CPT2P23786 658 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 FASP25445 335 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 GRK5P34947 590 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 DDOSTP39656 456 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 PRKXP51817 358 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 SLC25A1P53007 311 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 DEFA6Q01524 100 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 BNIP1Q12981 228 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 CRMP1Q14194 572 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 OR8G1Q15617 311 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 TRIP10Q15642 601 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 KCNJ8Q15842 424 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 SNAPC1Q16533 368 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 KLHL12Q53G59 568 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 C1orf146Q5VVC0 180 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 DCAF12L2Q5VW00 463 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 OTPQ5XKR4 325 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 ZNF770Q6IQ21 691 aaPredicted RBP4.72□□□□□ -1.65
LINC00458-201ENST00000423442 KCTD18Q6PI47 426 aaPredicted RBP4.72□□□□□ -1.65
LINC00458-201ENST00000423442 C18orf65Q6ZTR6 163 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 CCDC121Q6ZUS5 278 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 NAA40Q86UY6 237 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 KLBQ86Z14 1044 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 ERI1Q8IV48 349 aaKnown RBP4.72□□□□□ -1.65
LINC00458-201ENST00000423442 MUC20Q8N307 709 aaPredicted RBP4.72□□□□□ -1.65
LINC00458-201ENST00000423442 FTMTQ8N4E7 242 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 SPICQ8N5J4 248 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 SPERTQ8NA61 448 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 BHLHE23Q8NDY6 225 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 OR4M2Q8NGB6 313 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 OR52H1Q8NGJ2 320 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 OR9Q1Q8NGQ5 310 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 SGMS2Q8NHU3 365 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 ERGIC1Q969X5 290 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 SLAMF6Q96DU3 332 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 ZNF799Q96GE5 643 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 HIST1H2AAQ96QV6 131 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 OR2V2Q96R30 315 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 NIPSNAP1Q9BPW8 284 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 NUDT16L1Q9BRJ7 211 aaKnown RBP4.72□□□□□ -1.65
LINC00458-201ENST00000423442 C1QTNF5Q9BXJ0 243 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 WDR76Q9H967 626 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 SEPSECSQ9HD40 501 aaKnown RBP4.72□□□□□ -1.65
LINC00458-201ENST00000423442 CMC2Q9NRP2 79 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 TMEM106BQ9NUM4 274 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 ARMC1Q9NVT9 282 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 MIOXQ9UGB7 285 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 WIPI2Q9Y4P8 454 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 ORC6Q9Y5N6 252 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 NPTNQ9Y639 398 aa4.72□□□□□ -1.65
LINC00458-201ENST00000423442 PRKDCP78527 4128 aaKnown RBP4.72□□□□□ -1.65
LINC00458-201ENST00000423442 ZSCAN5BA6NJL1 495 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 IQCF6A8MYZ5 107 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 J3QLI3 93 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 XRCC2O43543 280 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 SPRY2O43597 315 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 PLPP2O43688 288 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 FOXH1O75593 365 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 RP2O75695 350 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 GLCEO94923 617 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 PNPP00491 289 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 HLA-DPB1P04440 258 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 FCGR1AP12314 374 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 IL2RGP31785 369 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 ATP6V1E1P36543 226 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 MDH2P40926 338 aaKnown RBP4.71□□□□□ -1.66
LINC00458-201ENST00000423442 ERFP50548 548 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 CRISP1P54107 249 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 LMO4P61968 165 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 BTG1P62324 171 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 ESRRGP62508 458 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 CDK5Q00535 292 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 GK2Q14410 553 aaPredicted RBP4.71□□□□□ -1.66
LINC00458-201ENST00000423442 ESCO2Q56NI9 601 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 TEX30Q5JUR7 227 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 SLC35D3Q5M8T2 416 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 HIST2H2BDQ6DRA6 164 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 PLBD1Q6P4A8 553 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 RBMS3Q6XE24 437 aaKnown RBP4.71□□□□□ -1.66
LINC00458-201ENST00000423442 CFAP77Q6ZQR2 320 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 ZNF771Q7L3S4 317 aaPredicted RBP4.71□□□□□ -1.66
LINC00458-201ENST00000423442 DPY19L4Q7Z388 723 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 KRT77Q7Z794 578 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 LRRC28Q86X40 367 aaPredicted RBP4.71□□□□□ -1.66
LINC00458-201ENST00000423442 SPARTQ8N0X7 666 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 RFLNBQ8N5W9 214 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 C3orf56Q8N813 242 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 PAPD5Q8NDF8 572 aaKnown RBP4.71□□□□□ -1.66
LINC00458-201ENST00000423442 CSNK2A3Q8NEV1 391 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 OR6N2Q8NGY6 317 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 OR8S1Q8NH09 359 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 OR5K1Q8NHB7 308 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 NANPQ8TBE9 248 aa4.71□□□□□ -1.66
LINC00458-201ENST00000423442 ZNF418Q8TF45 676 aaPredicted RBP4.71□□□□□ -1.66
LINC00458-201ENST00000423442 WIPF2Q8TF74 440 aaPredicted RBP4.71□□□□□ -1.66
LINC00458-201ENST00000423442 ITLN1Q8WWA0 313 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms