RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 RPL3LQ92901 407 aaKnown RBP12.56□□□□□ -0.4
USB1-202ENST00000423271 SLC25A28Q96A46 364 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 WDFY2Q96P53 400 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 RTL8AQ9BWD3 113 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 SIRPDQ9H106 197 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 VCX3BQ9H321 246 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 KAAG1Q9UBP8 84 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 RPL36Q9Y3U8 105 aaKnown RBP12.56□□□□□ -0.4
USB1-202ENST00000423271 MPC1Q9Y5U8 109 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 HSPE1-MOB4S4R3N1 261 aa12.56□□□□□ -0.4
USB1-202ENST00000423271 TMEM269A0A1B0GVZ9 245 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 ANXA2P2A6NMY6 339 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 SRRM5B3KS81 715 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 P2RY10O00398 339 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 HOXA3O43365 443 aaPredicted RBP12.55□□□□□ -0.4
USB1-202ENST00000423271 SRSF10O75494 262 aaKnown RBP12.55□□□□□ -0.4
USB1-202ENST00000423271 CST4P01036 141 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 TFF1P04155 84 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 KRT8P05787 483 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 SELLP14151 372 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 MUC1P15941 1255 aaPredicted RBP12.55□□□□□ -0.4
USB1-202ENST00000423271 AMY2BP19961 511 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 DCTDP32321 178 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 FOXL1Q12952 345 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 MICBQ29980 383 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 TP53I3Q53FA7 332 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 IZUMO2Q6UXV1 221 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 FTMTQ8N4E7 242 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 YIPF7Q8N8F6 280 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 PNLDC1Q8NA58 520 aaKnown RBP12.55□□□□□ -0.4
USB1-202ENST00000423271 OR5P3Q8WZ94 311 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 PIGCQ92535 297 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 PPP1R14AQ96A00 147 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 WDR13Q9H1Z4 485 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 MRPS18AQ9NVS2 196 aaKnown RBP12.55□□□□□ -0.4
USB1-202ENST00000423271 MYRFQ9Y2G1 1151 aa12.55□□□□□ -0.4
USB1-202ENST00000423271 CENPVL3A0A0U1RRI6 287 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 DAPL1A0PJW8 107 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 METTL15A6NJ78 407 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 RPP14O95059 124 aaKnown RBP12.54□□□□□ -0.4
USB1-202ENST00000423271 LIPFP07098 398 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 ARF6P62330 175 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 RAB40BQ12829 278 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 SNCBQ16143 134 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 ZNF829Q3KNS6 432 aaPredicted RBP12.54□□□□□ -0.4
USB1-202ENST00000423271 DMRTC1Q5HYR2 192 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 METTL11BQ5VVY1 283 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 STUMQ69YW2 141 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 LAIR2Q6ISS4 152 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 KCTD8Q6ZWB6 473 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 ZDHHC23Q8IYP9 409 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 ACBD7Q8N6N7 88 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 SCCPDHQ8NBX0 429 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 OR5T2Q8NGG2 359 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 OR52I1Q8NGK6 324 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 FBLIM1Q8WUP2 373 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 ZDHHC16Q969W1 377 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 PBOV1Q9GZY1 135 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 PRDM13Q9H4Q3 707 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 TNFRSF19Q9NS68 423 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 SNTG1Q9NSN8 517 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 RPUSD1Q9UJJ7 312 aaKnown RBP12.54□□□□□ -0.4
USB1-202ENST00000423271 R4GMQ9 66 aa12.54□□□□□ -0.4
USB1-202ENST00000423271 ACOD1A6NK06 481 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 TMEM210A6NLX4 147 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 LOC110117498-PIK3R3F6TDL0 507 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 AKR7A2O43488 359 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 SULT1C4O75897 302 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 FADS2O95864 444 aaKnown RBP12.53□□□□□ -0.4
USB1-202ENST00000423271 ECDO95905 644 aaPredicted RBP12.53□□□□□ -0.4
USB1-202ENST00000423271 IGHA1P01876 353 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 IKZF1Q13422 519 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 KLHL22Q53GT1 634 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 THAP5Q7Z6K1 395 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 LHFPL3Q86UP9 236 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 OR10Z1Q8NGY1 313 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 LHX4Q969G2 390 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 RNF170Q96K19 258 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 ZNF747Q9BV97 191 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 ABCB9Q9NP78 766 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 FGF20Q9NP95 211 aaPredicted RBP12.53□□□□□ -0.4
USB1-202ENST00000423271 ACOXLQ9NUZ1 547 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 NUFIP1Q9UHK0 495 aaKnown RBP12.53□□□□□ -0.4
USB1-202ENST00000423271 ZNF391Q9UJN7 358 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 GNG8Q9UK08 70 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 GTF2A1LQ9UNN4 478 aa12.53□□□□□ -0.4
USB1-202ENST00000423271 IGHV1-69DA0A0B4J2H0 117 aa12.52□□□□□ -0.41
USB1-202ENST00000423271 A0A0U1RQV5 110 aa12.52□□□□□ -0.41
USB1-202ENST00000423271 ZNF816-ZNF321PA0A0X1KG74 233 aa12.52□□□□□ -0.41
USB1-202ENST00000423271 RHBDL1O75783 438 aa12.52□□□□□ -0.41
USB1-202ENST00000423271 IGLV3-1P01715 115 aa12.52□□□□□ -0.41
USB1-202ENST00000423271 IGHV1-69P01742 117 aa12.52□□□□□ -0.41
USB1-202ENST00000423271 TTRP02766 147 aa12.52□□□□□ -0.41
USB1-202ENST00000423271 VHLP40337 213 aa12.52□□□□□ -0.41
USB1-202ENST00000423271 GPM6AP51674 278 aa12.52□□□□□ -0.41
USB1-202ENST00000423271 OR12D2P58182 307 aa12.52□□□□□ -0.41
USB1-202ENST00000423271 BPIFB3P59826 476 aa12.52□□□□□ -0.41
USB1-202ENST00000423271 PRB3Q04118 309 aaPredicted RBP12.52□□□□□ -0.41
USB1-202ENST00000423271 GALEQ14376 348 aa12.52□□□□□ -0.41
USB1-202ENST00000423271 CDONQ4KMG0 1287 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms