RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 METTL11BQ5VVY1 283 aa18.15■□□□□ 0.5
TRAF4-204ENST00000422344 STUMQ69YW2 141 aa18.15■□□□□ 0.5
TRAF4-204ENST00000422344 HAGHLQ6PII5 290 aaPredicted RBP18.15■□□□□ 0.5
TRAF4-204ENST00000422344 BCL6BQ8N143 479 aaPredicted RBP18.15■□□□□ 0.5
TRAF4-204ENST00000422344 OR14K1Q8NGZ2 314 aa18.15■□□□□ 0.5
TRAF4-204ENST00000422344 FAM216AQ8WUB2 273 aa18.15■□□□□ 0.5
TRAF4-204ENST00000422344 RORBQ92753 470 aa18.15■□□□□ 0.5
TRAF4-204ENST00000422344 GCDHQ92947 438 aaPredicted RBP18.15■□□□□ 0.5
TRAF4-204ENST00000422344 TMIGD2Q96BF3 282 aa18.15■□□□□ 0.5
TRAF4-204ENST00000422344 DNTTIP1Q9H147 329 aa18.15■□□□□ 0.5
TRAF4-204ENST00000422344 PCDHGB1Q9Y5G3 927 aa18.15■□□□□ 0.5
TRAF4-204ENST00000422344 A0A1B0GW55 424 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 MPZL2O60487 215 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 RHBDL1O75783 438 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 TOX4O94842 621 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 DUX4L2P0CJ85 424 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 DUX4L3P0CJ86 424 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 DUX4L4P0CJ87 422 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 DUX4L5P0CJ88 424 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 DUX4L6P0CJ89 424 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 DUX4L7P0CJ90 424 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 ELF3P78545 371 aaPredicted RBP18.14■□□□□ 0.49
TRAF4-204ENST00000422344 ZNF85Q03923 595 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 DUX4L9Q6RFH8 374 aaPredicted RBP18.14■□□□□ 0.49
TRAF4-204ENST00000422344 ZNF573Q86YE8 665 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 AQP3Q92482 292 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 MED30Q96HR3 178 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 SLC29A1Q99808 456 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 ACOXLQ9NUZ1 547 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 NLKQ9UBE8 527 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 DUX4Q9UBX2 424 aa18.14■□□□□ 0.49
TRAF4-204ENST00000422344 GPR37O15354 613 aa18.13■□□□□ 0.49
TRAF4-204ENST00000422344 PLATP00750 562 aa18.13■□□□□ 0.49
TRAF4-204ENST00000422344 CCL1P22362 96 aa18.13■□□□□ 0.49
TRAF4-204ENST00000422344 COMPP49747 757 aaPredicted RBP18.13■□□□□ 0.49
TRAF4-204ENST00000422344 IL13RA1P78552 427 aa18.13■□□□□ 0.49
TRAF4-204ENST00000422344 ATPAF1Q5TC12 328 aaPredicted RBP18.13■□□□□ 0.49
TRAF4-204ENST00000422344 CCDC54Q8NEL0 328 aa18.13■□□□□ 0.49
TRAF4-204ENST00000422344 MRPL48Q96GC5 212 aaKnown RBP18.13■□□□□ 0.49
TRAF4-204ENST00000422344 Q96MT0 163 aa18.13■□□□□ 0.49
TRAF4-204ENST00000422344 WDFY2Q96P53 400 aa18.13■□□□□ 0.49
TRAF4-204ENST00000422344 ESM1Q9NQ30 184 aa18.13■□□□□ 0.49
TRAF4-204ENST00000422344 RPUSD1Q9UJJ7 312 aaKnown RBP18.13■□□□□ 0.49
TRAF4-204ENST00000422344 ANKRD61A6NGH8 418 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 A6NIN4 97 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 OR2AT4A6NND4 320 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 E9PQ18 207 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 H3BSH0 61 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 UBCP0CG48 685 aaKnown RBP18.12■□□□□ 0.49
TRAF4-204ENST00000422344 HAAOP46952 286 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 TGM4P49221 684 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 UBA52P62987 128 aaKnown RBP18.12■□□□□ 0.49
TRAF4-204ENST00000422344 BAMBIQ13145 260 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 ZSCAN26Q16670 478 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 TMEM42Q69YG0 159 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 C9orf139Q6ZV77 190 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 KCTD20Q7Z5Y7 419 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 ZDHHC22Q8N966 263 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 H1FXQ92522 213 aaKnown RBP18.12■□□□□ 0.49
TRAF4-204ENST00000422344 MYCBPQ99417 103 aaPredicted RBP18.12■□□□□ 0.49
TRAF4-204ENST00000422344 CNTD2Q9H8S5 307 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 RASL12Q9NYN1 266 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 SLC7A11Q9UPY5 501 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 POLDIP2Q9Y2S7 368 aa18.12■□□□□ 0.49
TRAF4-204ENST00000422344 PKD1L1Q8TDX9 2849 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 LOC100130705A0A1B0GUX0 176 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 TMEM89A2RUT3 159 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 J3QT63 122 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 FCN3O75636 299 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 SFTPBP07988 381 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 GABRA2P47869 451 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 BPIFB3P59826 476 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 ARF6P62330 175 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 BRD3OSQ6XYD6 125 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 ZNF788Q6ZQV5 615 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 Q6ZSR3 168 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 ENTHD1Q8IYW4 607 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 FGFRL1Q8N441 504 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 ACBD7Q8N6N7 88 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 ZNF555Q8NEP9 628 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 SGMS2Q8NHU3 365 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 ANGPTL6Q8NI99 470 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 ZMAT3Q9HA38 289 aaKnown RBP18.11■□□□□ 0.49
TRAF4-204ENST00000422344 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.11■□□□□ 0.49
TRAF4-204ENST00000422344 ONECUT1Q9UBC0 465 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 AASSQ9UDR5 926 aa18.11■□□□□ 0.49
TRAF4-204ENST00000422344 PQLC2LA1A4F0 135 aa18.1■□□□□ 0.49
TRAF4-204ENST00000422344 SLC16A6O15403 523 aa18.1■□□□□ 0.49
TRAF4-204ENST00000422344 GATBO75879 557 aaKnown RBP18.1■□□□□ 0.49
TRAF4-204ENST00000422344 AMY2BP19961 511 aa18.1■□□□□ 0.49
TRAF4-204ENST00000422344 ISL1P61371 349 aa18.1■□□□□ 0.49
TRAF4-204ENST00000422344 ACTA2P62736 377 aa18.1■□□□□ 0.49
TRAF4-204ENST00000422344 ACTG2P63267 376 aa18.1■□□□□ 0.49
TRAF4-204ENST00000422344 ZNF91Q05481 1191 aa18.1■□□□□ 0.49
TRAF4-204ENST00000422344 PDCD1Q15116 288 aa18.1■□□□□ 0.49
TRAF4-204ENST00000422344 SMIM21Q3B7S5 101 aa18.1■□□□□ 0.49
TRAF4-204ENST00000422344 CDONQ4KMG0 1287 aa18.1■□□□□ 0.49
TRAF4-204ENST00000422344 CMTM4Q8IZR5 234 aa18.1■□□□□ 0.49
TRAF4-204ENST00000422344 PRSS35Q8N3Z0 413 aa18.1■□□□□ 0.49
TRAF4-204ENST00000422344 POC1AQ8NBT0 407 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms