RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 RIPPLY1Q0D2K3 151 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 KLRD1Q13241 179 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 SMIM21Q3B7S5 101 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 CEP78Q5JTW2 689 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 PLCXD3Q63HM9 321 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 ZNF679Q8IYX0 411 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 ZSCAN4Q8NAM6 433 aaPredicted RBP9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 TMEM185AQ8NFB2 350 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 OR5A2Q8NGI9 324 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 ZNF671Q8TAW3 534 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 NRBF2Q96F24 287 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 OR8B4Q96RC9 309 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 CNN2Q99439 309 aaKnown RBP9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 PBOV1Q9GZY1 135 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 SEMA6AQ9H2E6 1030 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 MOB1AQ9H8S9 216 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 ENPP5Q9UJA9 477 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 ZNF222Q9UK12 451 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 NOTCH1P46531 2555 aa9.47□□□□□ -0.89
SQSTM1-203ENST00000422245 MEIOCA2RUB1 952 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 GSC2O15499 205 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 MTRF1O75570 445 aaKnown RBP9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 RHBDL1O75783 438 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 DHRS3O75911 302 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 IGLV3-1P01715 115 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 TFF1P04155 84 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 MRPL3P09001 348 aaKnown RBP9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 FAHP16930 419 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 TGFBR2P37173 567 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 GABRA2P47869 451 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 CRISP1P54107 249 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 DEFA6Q01524 100 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 MIDNQ504T8 468 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 PDLIM3Q53GG5 364 aaPredicted RBP9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 TMEM236Q5W0B7 351 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 FAHD1Q6P587 224 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 HAGHLQ6PII5 290 aaPredicted RBP9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 Q6ZSV7 163 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 OR5D13Q8NGL4 314 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 OR51E1Q8TCB6 317 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 AQP3Q92482 292 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 SDSLQ96GA7 329 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 MNTQ99583 582 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 TEAD3Q99594 435 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 C16orf95Q9H693 158 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 GPR84Q9NQS5 396 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 RASL12Q9NYN1 266 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 IKZF2Q9UKS7 526 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 PIGLQ9Y2B2 252 aa9.46□□□□□ -0.9
SQSTM1-203ENST00000422245 A0A1W2PRD5 423 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 A0A1W2PRF3 423 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 A0A1W2PRM7 423 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 SLC22A31A6NKX4 558 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 PRR32B1ATL7 298 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 H0YAE9 185 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 J3QT63 122 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 PSMD9O00233 223 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 TSPAN9O75954 239 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 PSG2P11465 335 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 CAPZA1P52907 286 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 HCCSP53701 268 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 KRTAP10-3P60369 221 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 ACTR3P61158 418 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 ESRRGP62508 458 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 PRB3Q04118 309 aaPredicted RBP9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 MFGE8Q08431 387 aaPredicted RBP9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 ZNF684Q5T5D7 378 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 MOB3CQ70IA8 216 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 FAM185AQ8N0U4 392 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 POC1AQ8NBT0 407 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 BEND2Q8NDZ0 799 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 UBE2FQ969M7 185 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 DUS3LQ96G46 650 aaKnown RBP9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 RBM4BQ9BQ04 359 aaKnown RBP9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 ELL3Q9HB65 397 aaPredicted RBP9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 TCF7L1Q9HCS4 588 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 COPS3Q9UNS2 423 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 POMPQ9Y244 141 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 POLDIP2Q9Y2S7 368 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 SF3B6Q9Y3B4 125 aaKnown RBP9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 MAB21L2Q9Y586 359 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 VWFP04275 2813 aa9.45□□□□□ -0.9
SQSTM1-203ENST00000422245 A0A1W2PPH5 198 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 DHRS7CA6NNS2 312 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 LOC110117498-PIK3R3F6TDL0 507 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 SLC1A7O00341 560 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 ANGPTL7O43827 346 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 PRKYO43930 277 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 DNAJC8O75937 253 aaPredicted RBP9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 NRASP01111 189 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 TTRP02766 147 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 DLX1P56177 255 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 PTGES3Q15185 160 aaKnown RBP9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 CLVS2Q5SYC1 327 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 BCL2L15Q5TBC7 163 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 TMEM42Q69YG0 159 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 ASPHD2Q6ICH7 369 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 ZNF322Q6U7Q0 402 aaPredicted RBP9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 ACP7Q6ZNF0 438 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 ZNF573Q86YE8 665 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms