RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ZNF2Q9BSG1 426 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-206ENST00000421141 RPA2P15927 270 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 TATDN3Q17R31 274 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 IL17BQ9UHF5 180 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 A3GALT2U3KPV4 340 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 FXYD1O00168 92 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 CD1EP15812 388 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 PSMB1P20618 241 aaKnown RBP9.51□□□□□ -0.89
PTCH1-206ENST00000421141 PTBP1P26599 531 aaKnown RBP eCLIP9.51□□□□□ -0.893e-8■■■■□ 20.8
PTCH1-206ENST00000421141 CST9LP1Q5W188 147 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 CD300LDQ6UXZ3 194 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 ZNF546Q86UE3 836 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 MUC20Q8N307 709 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-206ENST00000421141 GPR32P1Q8NGA4 272 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 ABHD17AQ96GS6 310 aa9.51□□□□□ -0.89
PTCH1-206ENST00000421141 TRAV1-2A0A0B4J238 106 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 TMEM200CA6NKL6 621 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 NUDT19A8MXV4 375 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 TIAF1O95411 115 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 ALOX5APP20292 161 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 CDKN2AP42771 156 aaKnown RBP9.5□□□□□ -0.89
PTCH1-206ENST00000421141 SLC35A2P78381 396 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 ZNF239Q16600 458 aaKnown RBP9.5□□□□□ -0.89
PTCH1-206ENST00000421141 GATA6Q92908 595 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 AQP7O14520 342 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 TSPAN2O60636 221 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 SCAF4O95104 1147 aaKnown RBP9.5□□□□□ -0.89
PTCH1-206ENST00000421141 NXPH3O95157 252 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 TMEM52Q8NDY8 209 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 KIR2DS2P43631 304 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 VMA21Q3ZAQ7 101 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 FKBP11Q9NYL4 201 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 RPH3ALQ9UNE2 315 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 TIMM8BQ9Y5J9 83 aaPredicted RBP9.5□□□□□ -0.89
PTCH1-206ENST00000421141 KIAA1549LQ6ZVL6 1849 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 SULT1C2O00338 296 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 TPPPO94811 219 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 PTGFRP43088 359 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 RFX2P48378 723 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 PCOLCEQ15113 449 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 SLC25A35Q3KQZ1 300 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 CDCP2Q5VXM1 449 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 OR8G2PQ6IF36 304 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 ELOVL5Q9NYP7 299 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 TREM2Q9NZC2 230 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 MAGEB4O15481 346 aaPredicted RBP9.5□□□□□ -0.89
PTCH1-206ENST00000421141 NGFP01138 241 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 FCGR2CP31995 323 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 GABRA4P48169 554 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 GNG10P50151 68 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 SLC38A6Q8IZM9 456 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 OR10AD1Q8NGE0 317 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 GINS3Q9BRX5 216 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 FLVCR1Q9Y5Y0 555 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 SH2D7A6NKC9 451 aaPredicted RBP9.5□□□□□ -0.89
PTCH1-206ENST00000421141 TMEM210A6NLX4 147 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 F2RL2O00254 374 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 SMPD2O60906 423 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 SPDEFO95238 335 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 ZIC2O95409 532 aaPredicted RBP9.5□□□□□ -0.89
PTCH1-206ENST00000421141 PDZD9Q8IXQ8 264 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 OR5T1Q8NG75 326 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 OR13D1Q8NGV5 346 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 VWCEQ96DN2 955 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 POM121L2Q96KW2 1035 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 OR2H1Q9GZK4 316 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 C20orf85Q9H1P6 137 aa9.5□□□□□ -0.89
PTCH1-206ENST00000421141 NPIPB8E9PQR5 432 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 HRASP01112 189 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 RAP2BP61225 183 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 CDK5Q00535 292 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 MDP1Q86V88 176 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 OR51A4Q8NGJ6 313 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 OR13C5Q8NGS8 318 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 ZNF649Q9BS31 505 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 PTDSS2Q9BVG9 487 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 SMIM3Q9BZL3 60 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 OPN3Q9H1Y3 402 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-206ENST00000421141 TNFRSF19Q9NS68 423 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 ELK1P19419 428 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 CSN1S1P47710 185 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 ZNF266Q14584 549 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 SUMF1Q8NBK3 374 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 OR10R2Q8NGX6 335 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 NUDT16L1Q9BRJ7 211 aaKnown RBP9.49□□□□□ -0.89
PTCH1-206ENST00000421141 MFFQ9GZY8 342 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 CLN8Q9UBY8 286 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 RNF115Q9Y4L5 304 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 A0A1W2PS29 197 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 CTDSP2O14595 271 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 IFI6P09912 130 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 FOXL2P58012 376 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 SPACA3Q8IXA5 215 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 OR13F1Q8NGS4 319 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 ZFAND2BQ8WV99 257 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 HPSE2Q8WWQ2 592 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 RPL3LQ92901 407 aaKnown RBP9.49□□□□□ -0.89
PTCH1-206ENST00000421141 CEPT1Q9Y6K0 416 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 PNPP00491 289 aa9.49□□□□□ -0.89
PTCH1-206ENST00000421141 ALDH3B2P48448 385 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms