RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 PPP1R1AQ13522 171 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 SLC10A1Q14973 349 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 TSC22D1Q15714 1073 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 PIGYQ3MUY2 71 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 DRAM2Q6UX65 266 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 PIP4P1Q86T03 277 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 OR8H3Q8N146 312 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 PNLDC1Q8NA58 520 aaKnown RBP7.64□□□□□ -1.19
SNCA-206ENST00000420646 HAS2Q92819 552 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 FER1L6-AS2Q96M78 137 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 FAAP24Q9BTP7 215 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 FXYD6Q9H0Q3 95 aa7.64□□□□□ -1.19
SNCA-206ENST00000420646 RALYQ9UKM9 306 aaKnown RBP7.64□□□□□ -1.19
SNCA-206ENST00000420646 IGKV1-12A0A0C4DH73 117 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 LOC105371267A0A1B0GV96 52 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 UBE2QL1A1L167 161 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 SULT1C2O00338 296 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 MSTNO14793 375 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 NME2P1O60361 137 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 MTRF1O75570 445 aaKnown RBP7.63□□□□□ -1.19
SNCA-206ENST00000420646 IGKV1D-12P01611 117 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 CD74P04233 296 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 IL5P05113 134 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 NME2P22392 152 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 OPRM1P35372 400 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 GSK3AP49840 483 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 PER3P56645 1201 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 RPS27AP62979 156 aaKnown RBP7.63□□□□□ -1.19
SNCA-206ENST00000420646 ZNF766Q5HY98 468 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 KCTD9Q7L273 389 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 CALHM1Q8IU99 346 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 OR52H1Q8NGJ2 320 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 ST8SIA4Q92187 359 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 TMPRSS13Q9BYE2 586 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 ZNF701Q9NV72 531 aaPredicted RBP7.63□□□□□ -1.19
SNCA-206ENST00000420646 UPB1Q9UBR1 384 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 OPN4Q9UHM6 478 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 MCTS1Q9ULC4 181 aaKnown RBP7.63□□□□□ -1.19
SNCA-206ENST00000420646 USP24Q9UPU5 2620 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 MED12LQ86YW9 2145 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 TEX46H3BTG2 121 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 LILRA1O75019 489 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 SYNGR4O95473 234 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 IFNA6P05013 189 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 SFTPBP07988 381 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 MELTFP08582 738 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 NAT2P11245 290 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 PRF1P14222 555 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 THBS4P35443 961 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 SORDQ00796 357 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 RIPPLY1Q0D2K3 151 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 ATXN7L3Q14CW9 347 aaPredicted RBP7.63□□□□□ -1.19
SNCA-206ENST00000420646 SPATA46Q5T0L3 261 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 TEX261Q6UWH6 196 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 ZNF680Q8NEM1 530 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 GPR137Q96N19 417 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 HS3ST6Q96QI5 342 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 GPR160Q9UJ42 338 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 PLEKHA6Q9Y2H5 1048 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 MRPS18CQ9Y3D5 142 aaKnown RBP7.63□□□□□ -1.19
SNCA-206ENST00000420646 U3KQ87 197 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 SHANK1Q9Y566 2161 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 A0A0A6YYH2 397 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 A6NJ64 397 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 ZNF850A8MQ14 1090 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 SNRPGP15A8MWD9 76 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 KLRC4-KLRK1H3BQV0 150 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 MFNGO00587 321 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 GEMIN2O14893 280 aaKnown RBP7.63□□□□□ -1.19
SNCA-206ENST00000420646 NRASP01111 189 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 CPN1P15169 458 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 NPBWR2P48146 333 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 MECP2P51608 486 aaKnown RBP7.63□□□□□ -1.19
SNCA-206ENST00000420646 RAB1AP62820 205 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 GK2Q14410 553 aaPredicted RBP7.63□□□□□ -1.19
SNCA-206ENST00000420646 BEX5Q5H9J7 111 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 LY6G6FQ5SQ64 297 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 SIGIRRQ6IA17 410 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 MOB3CQ70IA8 216 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 ZNF100Q8IYN0 542 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 OR5M9Q8NGP3 310 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 MED30Q96HR3 178 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 C1QTNF6Q9BXI9 259 aa7.63□□□□□ -1.19
SNCA-206ENST00000420646 FBXO9Q9UK97 447 aaPredicted RBP7.63□□□□□ -1.19
SNCA-206ENST00000420646 NOP16Q9Y3C1 178 aaKnown RBP7.63□□□□□ -1.19
SNCA-206ENST00000420646 PKD1L2Q7Z442 2459 aa7.62□□□□□ -1.19
SNCA-206ENST00000420646 F8VVB4 439 aa7.62□□□□□ -1.19
SNCA-206ENST00000420646 F8VWA3 439 aa7.62□□□□□ -1.19
SNCA-206ENST00000420646 TPPPO94811 219 aa7.62□□□□□ -1.19
SNCA-206ENST00000420646 OR2A4O95047 310 aa7.62□□□□□ -1.19
SNCA-206ENST00000420646 FARS2O95363 451 aaKnown RBP7.62□□□□□ -1.19
SNCA-206ENST00000420646 CD46P15529 392 aa7.62□□□□□ -1.19
SNCA-206ENST00000420646 SOX8P57073 446 aa7.62□□□□□ -1.19
SNCA-206ENST00000420646 PDSS1Q5T2R2 415 aa7.62□□□□□ -1.19
SNCA-206ENST00000420646 RIPPLY2Q5TAB7 128 aa7.62□□□□□ -1.19
SNCA-206ENST00000420646 SPICQ8N5J4 248 aa7.62□□□□□ -1.19
SNCA-206ENST00000420646 ZFP62Q8NB50 900 aaPredicted RBP7.62□□□□□ -1.19
SNCA-206ENST00000420646 STEAP2Q8NFT2 490 aa7.62□□□□□ -1.19
SNCA-206ENST00000420646 PP6455Q8WZ26 134 aa7.62□□□□□ -1.19
SNCA-206ENST00000420646 APH1AQ96BI3 265 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms