RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 NGFP01138 241 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 HLA-DQB1P01920 261 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 CSTBP04080 98 aaKnown RBP5.12□□□□□ -1.59
HMGB3-202ENST00000419110 TMEM225BP0DP42 221 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF35P13682 527 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 MGMTP16455 207 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 HOXB4P17483 251 aaPredicted RBP5.12□□□□□ -1.59
HMGB3-202ENST00000419110 SERPINA2P20848 420 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 CDK2P24941 298 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 PTAFRP25105 342 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 ALDH3B1P43353 468 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 UCP2P55851 309 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 KLF3P57682 345 aaPredicted RBP5.12□□□□□ -1.59
HMGB3-202ENST00000419110 AP3S2P59780 193 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 SELENOVP59797 346 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 ACTBP60709 375 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 ERVS71-1P61550 626 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 GNG3P63215 75 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 ACTG1P63261 375 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 ARL6IP1Q15041 203 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 RSU1Q15404 277 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 OR8G1Q15617 311 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 UBE2V2Q15819 145 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 SLC22A6Q4U2R8 563 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 RNASE12Q5GAN4 147 aaKnown RBP5.12□□□□□ -1.59
HMGB3-202ENST00000419110 STEAP3Q658P3 488 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF57Q68EA5 555 aaPredicted RBP5.12□□□□□ -1.59
HMGB3-202ENST00000419110 OR2T2Q6IF00 324 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 MZT2BQ6NZ67 158 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 FIP1L1Q6UN15 594 aaKnown RBP5.12□□□□□ -1.59
HMGB3-202ENST00000419110 PCSK4Q6UW60 755 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 LYSMD2Q8IV50 215 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 IZUMO1Q8IYV9 350 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF611Q8N823 705 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 POC5Q8NA72 575 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 ZSCAN4Q8NAM6 433 aaPredicted RBP5.12□□□□□ -1.59
HMGB3-202ENST00000419110 ACBD4Q8NC06 268 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 OR56B1Q8NGI3 324 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 ENKURQ8TC29 256 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 SSC4DQ8WTU2 575 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 CA5BP1Q8WTZ4 195 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 HPSE2Q8WWQ2 592 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 DVL3Q92997 716 aaPredicted RBP5.12□□□□□ -1.59
HMGB3-202ENST00000419110 TRIM63Q969Q1 353 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 SLC25A28Q96A46 364 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 RADILQ96JH8 1075 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 NKX3-1Q99801 234 aaPredicted RBP5.12□□□□□ -1.59
HMGB3-202ENST00000419110 NUDT16L1Q9BRJ7 211 aaKnown RBP5.12□□□□□ -1.59
HMGB3-202ENST00000419110 C1QTNF6Q9BXI9 259 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 METTL9Q9H1A3 318 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 ESRP2Q9H6T0 727 aaKnown RBP5.12□□□□□ -1.59
HMGB3-202ENST00000419110 AUNIPQ9H7T9 357 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 C14orf119Q9NWQ9 140 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 IL36GQ9NZH8 169 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 NPAP1Q9NZP6 1156 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 PURGQ9UJV8 347 aaKnown RBP5.12□□□□□ -1.59
HMGB3-202ENST00000419110 POU2F3Q9UKI9 436 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 MRPS7Q9Y2R9 242 aaKnown RBP5.12□□□□□ -1.59
HMGB3-202ENST00000419110 POLDIP2Q9Y2S7 368 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 STARD10Q9Y365 291 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 RHBDD3Q9Y3P4 386 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 CACNA1BQ00975 2339 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 ZZEF1O43149 2961 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 PLSCR5A0PG75 271 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 PQLC2LA1A4F0 135 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 LRP5LA4QPB2 252 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 CENPXA8MT69 81 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 TMEM14DPA8MWL7 114 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 GABARAPH6UMI1 98 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 LDLRAD4O15165 306 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 GSTZ1O43708 216 aaPredicted RBP5.11□□□□□ -1.59
HMGB3-202ENST00000419110 CDC14BO60729 498 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 ECDO95905 644 aaPredicted RBP5.11□□□□□ -1.59
HMGB3-202ENST00000419110 LPLP06858 475 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 CSF3P09919 207 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 CD37P11049 281 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 KITLGP21583 273 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 CD40P25942 277 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 CALCRP30988 508 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 FAUP35544 74 aaKnown RBP5.11□□□□□ -1.59
HMGB3-202ENST00000419110 GLRXP35754 106 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 PTGFRP43088 359 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 GPM6AP51674 278 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 EFNB2P52799 333 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 GNG2P59768 71 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 ZP1P60852 638 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 RPS27AP62979 156 aaKnown RBP5.11□□□□□ -1.59
HMGB3-202ENST00000419110 ADORA2A-AS1P86434 159 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 DGCR2P98153 550 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 TLE1Q04724 770 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 SSBP1Q04837 148 aaKnown RBP5.11□□□□□ -1.59
HMGB3-202ENST00000419110 FAM27E3Q08E93 113 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 UNC119Q13432 240 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 TNK1Q13470 666 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 ASAH1Q13510 395 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 CEACAM21Q3KPI0 293 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 C2orf76Q3KRA6 126 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 MBNL2Q5VZF2 373 aaKnown RBP5.11□□□□□ -1.59
HMGB3-202ENST00000419110 CDH24Q86UP0 819 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 ANGPTL5Q86XS5 388 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms